Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01472 ATGGCTACGCCGCCTAATTCTTTTTGTTCTTTGTTCTTTATTTATTCCATTCTACTTTCTTCATTCTTCCTTGCCTATGAGGCACAAGCCTACCCCCCAGTAGTGAATGGACTATCATATTCTTTATATTCCCAAACCTGTCCCAAGCTTGAATCCATTGTGAGAAACCATCTTGAGAAGGAGTTCACGCAAGCTAGTTGGCAAGCTGCAGCCTTACTCGTCGTTTTCTTCCATGATTGTTTTGTTCAGGGATGTGATGGATCGTTGCTGCTGGATGGGAATCCAGGTGAAAGGGATCATCCACTCAACCGAGGCATAAGCCTTAAGGTTCTGCGGACCATTGATGATCTAAGGAATGTTGTTCACAATGAATGCGGCAGGATCGTTTCTTGTGCAGATATCACTGTCTTGGCAGCTCGTGACGCTGTTTACCTTTCTGGAGGTCCCAATTTTGCTGTGCCACTTGGAAGACGAGATAGTCTAAACTTTAGCTTCGAAGAAGTAAATAATCTTCCATTACCCTACAACATCACTAGTGTGACACTCCAGACATTTGCATCCAAAAACTTAGATGTCACAAATGTGGTTGCTTTAGTAGGTGCCCACACTCTTGGTCGTGCCCATTGTCACACATTCTACAATAGGCTTTCTCCTCTAGACCCCAACATGGATAAAACCCTAGCCAAAATCCTCAACACAACTTGCCCAAGTACATACTCACGTAACACTGCCAACTTGGACATAAGAACCCCCAAAGTGTTTGATAACAAATACTACATTAACTTAATGAATCGCCAGGGTTTGTTCACCTCTGACCAAGACTTGTTCACTGATAAGAGGACAAAGGGGCTAGTAGAGGCCTTTGCACACGATCAGACCTTATTCTTTGAGAAATTCGTGGATGGATTTATAAGGATGAGCCAATTGGATGTCTTGACGGGGAATCAAGGTGAAATTCGTGCAAAATGCAATGTCATAAACAATAAGAGACCTATAGTGACGTCTATTAATGTAGATGAGATGGTACAATTAATCTATTAG 1041 0.4246 MATPPNSFCSLFFIYSILLSSFFLAYEAQAYPPVVNGLSYSLYSQTCPKLESIVRNHLEKEFTQASWQAAALLVVFFHDCFVQGCDGSLLLDGNPGERDHPLNRGISLKVLRTIDDLRNVVHNECGRIVSCADITVLAARDAVYLSGGPNFAVPLGRRDSLNFSFEEVNNLPLPYNITSVTLQTFASKNLDVTNVVALVGAHTLGRAHCHTFYNRLSPLDPNMDKTLAKILNTTCPSTYSRNTANLDIRTPKVFDNKYYINLMNRQGLFTSDQDLFTDKRTKGLVEAFAHDQTLFFEKFVDGFIRMSQLDVLTGNQGEIRAKCNVINNKRPIVTSINVDEMVQLIY 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01472 346 ProSiteProfiles Plant heme peroxidase family profile. 37 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma16g01472 346 SUPERFAMILY Heme-dependent peroxidases 32 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma16g01472 346 Gene3D - 43 327 - -
Gma16g01472 346 Gene3D Peroxidase, domain 2 172 306 - -
Gma16g01472 346 Pfam Peroxidase 54 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma16g01472 346 PANTHER PEROXIDASE 16 331 - -
Gma16g01472 346 PANTHER PEROXIDASE 25-RELATED 16 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma16g01472 346 PRINTS Plant peroxidase signature 47 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma16g01472 346 PRINTS Plant peroxidase signature 71 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma16g01472 346 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma16g01472 346 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma16g01472 346 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma16g01472 346 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma16g01472 346 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma16g01472 346 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma16g01472 346 CDD secretory_peroxidase 37 326 IPR033905 GO:0004601|GO:0042744
Gma16g01472 346 PRINTS Haem peroxidase superfamily signature 69 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma16g01472 346 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma16g01472 346 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma16g01472 346 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma16g01472 346 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01472 Gma-Chr16 33954979 33957897 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01472 33 345 Peroxidase AT1G71695 51.250 1.86e-113 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01472 K00430 - gmx:100816373 682.559