Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01445 ATGTCCTCCTCTTCCTTTAGCTATGGATGGAAAtatgatgtgttcctcagcttcagaggctctgatactcgccatggttttactggtcatctctacaaagctctgtgtgatagaggaatccacaccttcattgatgatgaagagcttcaaagaggagaagagatcacaccattacttgtcaaggcaattgaagggtccaggattgccatccctgtgttctctaagaactatgcttcttccactttttgcttagatgaacttgtccacatccttgcctgtgttaaggaaaagggtacactggttttaccagttttttatgaggttgatccctctgatgtacgacatcaaagaggtagctacaaagatgcactgaatagccataaggagaggttcaatgatgaccaagagaaattgcagaaatggaggaattctctgagtcaagcagctaacttggctggttatcatttcaaacatgggattgaaaatgaatatgaatatgactttattggcaacattgttaaagaggtctcccaaaaaattaatcgcactgttttgcatgttgcggattacaccgttggactggagtttcgaatgaaagaagtaaactcgcttttgaatttcaaatctggtggagtacacatggtagggatccacggagttggcggagtaggcaaaacaacacttgctcgagcaatttacaatttgattgctgatcaatttgaagtattgtgttttcttgataatgtgagagaaaactcaattaaaaatggattggtgcatctccaagagacacttctttctaaaacaattggagagaagggtattaagttaggaagtatcaacgaagcaattccaataataaagcataggctccaccgaaagaaggttcttttggttctggatgatgttgacaaaccagatcagttgcatgcaattgctggagggatggattggtttggttctggtagcagagtcatcattaccactcgaaacagacatttactaacatgccatggggttgaaagcatatacgaggttcatgggttaaatcataaagaagctcttgaattgcttagttggagtgcttttaaaactggcaaagttgatccatgctatgtgaacattttaaaccgtgcagtaacttatgcttctggccttccattggctttgaaagtaattggctccaacttgattggaaaaaggatagaagaatgggaatctgccttagatcagtatcaaagaattcctaataaagatattcaagacatacttaaagtaagttttgattctttagaggaatatgaacagaatatttttcttgatattgcctgttgcttcaaaggatatcgtttgtcagaagttaaagaaatactttttagtcatcacggtttctgcccacaatatggtataggagtgttgatcgacaaatctctcataaagattgattgctttggtaacgtgacattgcatgacttgattgaagacatgggtaaagaaattgtccgaagggaatcaccagaagagcctgaaaatcgcagtaggttatggtgtcctgaagatatagttcaagtcttagaagaaaataagGGTACTAGTAGAATTCAAATGATAGCTCTGGATTATCTCAATTATGAAGAAGTAGAATGGGATGGAATGGCCTTCAAGGAGATGAATAACCTCAAAACACTTATCATTAGAGGTGGTTGCTTTACCACAGGTCCCAAACATCTTCCAAATAGTTTAAGAGTATTAGAATGGCGGCGATATCCTTCACCATCTCTACCATTTGATTTTAATCCGAAGAAACTTGTCTCACTACAGTTACCTGATAGTTGCTTAACGTCTCTCAATTGGCTCAACTCAAAGAATAGGTTCTTGAATATGAGAGTTTTGAATTTTAATCAGTGTCATTATATAACAGAGATACCTGACGTATGTGGTGCCCCAAATTTACAAGAATTATCATTTGAATATTGTGAGAATTTAATTAAAATTCATGTATCGGTTGGATTCCTGGATAAACTTAAAATCTTGGATGCTGATGGCTGCAGCAAGCTTACAAGTTTTCCACCAATGAAATTGACCTCTCTTGAAGAACTTAAACTTTCATTTTGTGCTAATCTTGAGTGTTTTCCAGAAATATTAGGGAAGATGGAAAATGTCACTTCCCTTGATATTAAAGACACTCCCATAAAAGAACTGCCATCTTCAATTCAACATCTCAGTCGACTTCAAAGAATTAAACTGAAGAATGGTGGAGTTATTCAGTTACCAAGTACCTTTTTTGCAATGAAAGAACTTCGTTATTTGCTTGTTAACCAATGTGAGGGGTTGCTACTACCTGTAGAGAACGAAGGGAAAGAACAGATGAGCTCAATGGTGGTTGAAAATACCATTGGTTATCTTGATCTTTCACATTGCCACATATCAGACAAATTCCTTCAAAGTGGTCTCCCTTTGTTTTCCAATGTGAAAGAACTATACCTAAATGGGAATGATTTCACAATTCTTCCTGCCTGCATTCAAGAATTTCAGTTTCTGACAGAACTTTATTTGGAAGCTTGTGAGAATCTTCATGAAATTGGATGGATTCCACCGAATTTAGAAATATTCGCTGTAATAGATTGCACATCCTTGAAAGAATTAGACCTCACACTTCTTCCCACATGGAACAAAGAATGTTGCCTTTTAAGGAAGCTTCTTTTATGTGGATGCCGGAATCTTGAAAAACTTAAAGGGATTCCACTGAACATAGAAGAATTGATTGTAGAATCCTGCAATTCCTTGAAAGATCTAGATCTTACTCTTCCTCCTTCATGCACCCGACAATGTCGTATTTTGAGTAAACTTATATTGGATAGTTGTATGGATTTTGAAGAAATAAAAGGGATTCCATCCGACATTGGAGTATTTTCTGCAAGAGAATGCTCATCCTTGACTTCTGAGTGTAGAAGCATGTTACTTAACGAGGAATTACATGAAGCCGATGGGTTCAAAGAGTTTATTTTGCCAGGAACTAGAATTCCCGAGTGGTTCGAGTGTACCAATGAATCATCAATTTGTTTCTGGTTTCGTGACAAGTTCCCTGCGATATCTGTCTGTGTAGTTTCTGAACCAATGGATTCAGATGTAACGTTCAGCTTTATCATCAATGCTTCCTTCCTTGTTCTCTCGCTAACCACTCTCTCATCAATCAAAGGTACTCATTGTGGGAATACAATGTCCTCCACTTCCTTTAGCAATGGATGGAAATATGATGTTTTCCTCAACTTCAGAGGCTCTGATACTCGCTATGGTTTTACTGGTCATCTCTACAAAGCTCTGTGTGATAGAAAAGTCCGCACCTTCATTGATGATGAGGAGCTTCAAAGAGGAGAACAGATCACACCATCACTCTTGAAGGCAATTGAAGAGTCCAGGATTTTCATCCCAGTGTTCTCCAAGAACTATGCCTCTTCCACTTTTTGCTTAGATGAACTTGTCCACATCTTTGCCTGTGTTAAGGAAAAGAGTAGATTAGTTTTGCCGGTTTTTTATGAGGTTGATCCTTCTCATGTACGACATCAAAGAGGTAGCTACAAAGAAGCACTGAATAGCCATAAGAAGAGGTTCAATGATGACCAAGAGAAATTGCAGAAATGGAGGAATGCTCTGAGTCAAGCAGCTAACTTGTCGGGCTATCATTTCAAACAGGGGAATGAAAATGAATACGATTTTATTGGGAAGATTGTTAAAGAGGTCTCCCAAAAAATTAATCGCACTCTTttacatgttgtggattaccctgttggattggagtctcgagtgctacaggaatcaccagaagaacctggaaatcgcagtaggttatgGTGTCCTGAAGATATAGTTCAAGTCTTAGAAGAAAATAAGGGAACTAGTAGAATTCAAATCATAAATCTGTATTGTTTCAAATATCGCGGAGTAGTAGAATGGGATGGAATGGCCTTCGAAAAGATGAATAACCTCAAAAGACTTATCATAGAAAGTGGTAGCTTTACCACAGGTCCCAAACATCTTCCAAATAGTTTAAGAGTATTAGAATGGTGGGACTATCCTTCACCATCTTTACCAATTGATTTTAATCCAAAGAAACTTGTCAAACTAGAGTTACTCGGTAGTTGCTTAATGTCTCTTGATTTGTTCATGTCAAAGAAGATGTTCGTGAATATGAGAGTTTTGAATTTTTCTGATTCTCAAAATATAACAGAGATACCTGACCTATGTGGTGTCCCAAATTTACAAGAATTATCATTTTGCAATTGTGAGAATTTAATTAAAATTCATGAATCGGTTGGATTTCTGGATAAACTTAAAATCTTGTATGCTGATGGCTGCAGCAAGCTTACGAGTTTTCCGCCAATCAAATTGACCTCTCTTGAAGAACTTAAACTTTCATACTGTGGTAGTCTTGAGTGTTTTCCAGAAATATTAGGGAAGATGGAAAATGTAACTTCCCTTGATATTAAAAACAGTCCCATAAAAGAATTGCCATCTTCAATTCAAAATCTCACTCAACTTCAAAGGATTAAACTGAAGAATGGTGGAATTATTCAGTTACCAAGTAGCATTTTTGGGATGAAAGAACTTCGTTATTTTATTGTTAAAAAATGTGAGGGGTTGCTACTATCCAAAGAGAACGAGGGGGAAGCACAAATGAGCTCAATGGTCTTTAGAAATCCCATTGATTTTCTTGATCTTTCACATTCCAATATATCAGACGAATTCCTTCTAAGAGGTCTCCCTTTGTTTGCCAATGTGAAAGAATTACACCTAAGAGGGGATGATTTCACAATTCTTCCAGCATGCATTAAAGAACTTCAGTTTTTGACAGAAATTTATTTGGAAGTTTGTGAGAATCTTAAAAAAATTAGAGGGATTCCACCTAATTTAGAAACACTCTGCGTAACAGATTGCACATCCTTGAGATGTTTGGACCTCACACTTCTTCCTTCATGCACCAAAGAATGTCGCTTTTTAAGGAAGCTTTTTTTATCTGGTTGCGATAATCTTAAAAAAATTAAAGGGATTCCACTGAACATAGAAGAATTGGATGTAGAATGCTGCATATCCTTGAAAGTTATAGATTTTACTCCTCCTCCTGCATGCACCCGAGAATGTCGCATTTTGAGTACACTTAATTTTGATTATTGTTCGGATCTTGAACAAATAAAAGGGATTCCCTCCAACGTTGGAAAATTTTCTGCAATAAACTGCGAATACTTGACTTCTGAGTGTAGAAGCATGTTACTGAATAAGGAATTGCATGAGGCCGATGGATACAAATTGTTTCGTTTGCCAGGAACAAGCATTCCAGAGTGGTTTGAGCATTGTATCAATGGATCATCAATTTCTTTCTGGTTTCGTAACAAGTTCCCTGTGATATCTCTATCTTGTGTTTTTGCTGGACTGGAGTTATATGCAGGAGTATGGTTCACACTTATCATCAATGGTAACAAATATTTATCCCCTCATATTTTCTTGGCGGATCTATCCAGTGATCTTCTGTGTATATGTGATCACATTGAGGAACTATTCTACGACCTTGTTCTTTCGGAAAATGAATGGAATCATGTGGTGTGTACTACATCATGGGTACCCCAACCAATCAAACAAATTGGAATCCATGTACTAAAACAAGGAAGCAACATGGAGGACATCCAATTTAGGAATCCGCTATTGTTGAAAGAAAAGCGAGATTTTCACAATTTACCAACATGGGGGAAAAAGAAGAGACTGGTGTTTGTCTCTTCCCGGAAATGA 5781 0.2659 MSSSSFSYGWKYDVFLSFRGSDTRHGFTGHLYKALCDRGIHTFIDDEELQRGEEITPLLVKAIEGSRIAIPVFSKNYASSTFCLDELVHILACVKEKGTLVLPVFYEVDPSDVRHQRGSYKDALNSHKERFNDDQEKLQKWRNSLSQAANLAGYHFKHGIENEYEYDFIGNIVKEVSQKINRTVLHVADYTVGLEFRMKEVNSLLNFKSGGVHMVGIHGVGGVGKTTLARAIYNLIADQFEVLCFLDNVRENSIKNGLVHLQETLLSKTIGEKGIKLGSINEAIPIIKHRLHRKKVLLVLDDVDKPDQLHAIAGGMDWFGSGSRVIITTRNRHLLTCHGVESIYEVHGLNHKEALELLSWSAFKTGKVDPCYVNILNRAVTYASGLPLALKVIGSNLIGKRIEEWESALDQYQRIPNKDIQDILKVSFDSLEEYEQNIFLDIACCFKGYRLSEVKEILFSHHGFCPQYGIGVLIDKSLIKIDCFGNVTLHDLIEDMGKEIVRRESPEEPENRSRLWCPEDIVQVLEENKGTSRIQMIALDYLNYEEVEWDGMAFKEMNNLKTLIIRGGCFTTGPKHLPNSLRVLEWRRYPSPSLPFDFNPKKLVSLQLPDSCLTSLNWLNSKNRFLNMRVLNFNQCHYITEIPDVCGAPNLQELSFEYCENLIKIHVSVGFLDKLKILDADGCSKLTSFPPMKLTSLEELKLSFCANLECFPEILGKMENVTSLDIKDTPIKELPSSIQHLSRLQRIKLKNGGVIQLPSTFFAMKELRYLLVNQCEGLLLPVENEGKEQMSSMVVENTIGYLDLSHCHISDKFLQSGLPLFSNVKELYLNGNDFTILPACIQEFQFLTELYLEACENLHEIGWIPPNLEIFAVIDCTSLKELDLTLLPTWNKECCLLRKLLLCGCRNLEKLKGIPLNIEELIVESCNSLKDLDLTLPPSCTRQCRILSKLILDSCMDFEEIKGIPSDIGVFSARECSSLTSECRSMLLNEELHEADGFKEFILPGTRIPEWFECTNESSICFWFRDKFPAISVCVVSEPMDSDVTFSFIINASFLVLSLTTLSSIKGTHCGNTMSSTSFSNGWKYDVFLNFRGSDTRYGFTGHLYKALCDRKVRTFIDDEELQRGEQITPSLLKAIEESRIFIPVFSKNYASSTFCLDELVHIFACVKEKSRLVLPVFYEVDPSHVRHQRGSYKEALNSHKKRFNDDQEKLQKWRNALSQAANLSGYHFKQGNENEYDFIGKIVKEVSQKINRTLLHVVDYPVGLESRVLQESPEEPGNRSRLWCPEDIVQVLEENKGTSRIQIINLYCFKYRGVVEWDGMAFEKMNNLKRLIIESGSFTTGPKHLPNSLRVLEWWDYPSPSLPIDFNPKKLVKLELLGSCLMSLDLFMSKKMFVNMRVLNFSDSQNITEIPDLCGVPNLQELSFCNCENLIKIHESVGFLDKLKILYADGCSKLTSFPPIKLTSLEELKLSYCGSLECFPEILGKMENVTSLDIKNSPIKELPSSIQNLTQLQRIKLKNGGIIQLPSSIFGMKELRYFIVKKCEGLLLSKENEGEAQMSSMVFRNPIDFLDLSHSNISDEFLLRGLPLFANVKELHLRGDDFTILPACIKELQFLTEIYLEVCENLKKIRGIPPNLETLCVTDCTSLRCLDLTLLPSCTKECRFLRKLFLSGCDNLKKIKGIPLNIEELDVECCISLKVIDFTPPPACTRECRILSTLNFDYCSDLEQIKGIPSNVGKFSAINCEYLTSECRSMLLNKELHEADGYKLFRLPGTSIPEWFEHCINGSSISFWFRNKFPVISLSCVFAGLELYAGVWFTLIINGNKYLSPHIFLADLSSDLLCICDHIEELFYDLVLSENEWNHVVCTTSWVPQPIKQIGIHVLKQGSNMEDIQFRNPLLLKEKRDFHNLPTWGKKKRLVFVSSRK 1926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01445 1926 PANTHER ARCHAEAL ATPASE 1708 1868 - -
Gma16g01445 1926 Gene3D - 1078 1259 IPR035897 -
Gma16g01445 1926 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1708 1868 IPR044974 GO:0006952
Gma16g01445 1926 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1274 1651 IPR044974 GO:0006952
Gma16g01445 1926 SMART till_3 11 151 IPR000157 GO:0007165
Gma16g01445 1926 SMART till_3 1084 1224 IPR000157 GO:0007165
Gma16g01445 1926 SUPERFAMILY L domain-like 801 980 - -
Gma16g01445 1926 Pfam NB-ARC domain 207 431 IPR002182 GO:0043531
Gma16g01445 1926 Gene3D - 6 178 IPR035897 -
Gma16g01445 1926 SUPERFAMILY Toll/Interleukin receptor TIR domain 1074 1227 IPR035897 -
Gma16g01445 1926 Coils Coil 1197 1217 - -
Gma16g01445 1926 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 881 IPR044974 GO:0006952
Gma16g01445 1926 Gene3D - 179 342 IPR027417 -
Gma16g01445 1926 SUPERFAMILY L domain-like 1315 1544 - -
Gma16g01445 1926 Coils Coil 124 144 - -
Gma16g01445 1926 PANTHER ARCHAEAL ATPASE 938 1033 - -
Gma16g01445 1926 PANTHER ARCHAEAL ATPASE 22 881 - -
Gma16g01445 1926 PANTHER ARCHAEAL ATPASE 1274 1651 - -
Gma16g01445 1926 Gene3D Ribonuclease Inhibitor 1297 1478 IPR032675 -
Gma16g01445 1926 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 938 1033 IPR044974 GO:0006952
Gma16g01445 1926 PANTHER ARCHAEAL ATPASE 1095 1271 - -
Gma16g01445 1926 SUPERFAMILY L domain-like 1570 1761 - -
Gma16g01445 1926 ProSiteProfiles TIR domain profile. 1083 1251 IPR000157 GO:0007165
Gma16g01445 1926 Gene3D Ribonuclease Inhibitor 525 707 IPR032675 -
Gma16g01445 1926 ProSiteProfiles TIR domain profile. 10 180 IPR000157 GO:0007165
Gma16g01445 1926 SUPERFAMILY Toll/Interleukin receptor TIR domain 1 154 IPR035897 -
Gma16g01445 1926 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 442 IPR027417 -
Gma16g01445 1926 SUPERFAMILY L domain-like 489 862 - -
Gma16g01445 1926 Gene3D - 348 432 IPR042197 -
Gma16g01445 1926 Gene3D Ribonuclease Inhibitor 1479 1699 IPR032675 -
Gma16g01445 1926 Gene3D Ribonuclease Inhibitor 708 920 IPR032675 -
Gma16g01445 1926 PRINTS Disease resistance protein signature 214 229 - -
Gma16g01445 1926 PRINTS Disease resistance protein signature 383 397 - -
Gma16g01445 1926 PRINTS Disease resistance protein signature 692 708 - -
Gma16g01445 1926 PRINTS Disease resistance protein signature 290 304 - -
Gma16g01445 1926 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1095 1271 IPR044974 GO:0006952
Gma16g01445 1926 Pfam TIR domain 11 184 IPR000157 GO:0007165
Gma16g01445 1926 Pfam TIR domain 1084 1254 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01445 Gma-Chr16 33515609 33553947 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01445 6 775 WRKY Transcription Factor Family AT4G12020 31.566 2.16e-86 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01445 - - gmx:121173697 2079.68