Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01415 ATGGCTAAGCATGATGTTGAGGGTGGTTCCTTCTCTGCAAAGGACTACCATGATCCTCCTCCAGCACCGTTGATTGATGCTGAGGAACTCACACAGTGGTCCTTCTACAGGGCTTTGATTGCTGAGTTCATTGCCACAATGCTCTTCCTTTACATCACAGTGCTCACTGTGATTGGTTACAAGAGCCAGAGTGATGTAAAGGCTGGGGGTGATGTGTGTGGTGGAGTTGGCATTCTTGGCATTGCTTGGGCCTTTGGTGGCATGATCTTCATTCTGGTGTACTGCACTGCTGGAATCTCAGGGGGTCACATAAACCCAGCAGTGACATTTGGGCTCTTCTTGGCTCGCAAGGTGTCTTTGATTAGAGCAATAATGTACATGGTGGCTCAGTGCTTGGGAGCCATATGTGGAGTTGGGTTGGTTAAGGCCTTCCAAAAGGCTTACTACAACAGGTATGGTGGTGGGGCCAATGAGCTCAGTGAAGGGTACAGCACGGGTGTTGGATTGGGTGCTGAGATCATTGGAACCTTTGTTTTGGTTTACACTGTGTTCTCTGCAACTGATCCCAAGAGGAATGCTAGAGATTCTCATGTGCCGGTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCAACCATCCCAGTAACAGGCACTGGCATTAACCCTGCTAGGAGTCTAGGAGCTGCTGTCATGTACAACCAACAGAAGGCCTGGGATGACCATTGGATCTTTTGGGTTGGACCATTTATTGGAGCAGCCATTGCAGCCTTCTACCACCAATTCATCTTGAGAGCAGGTGCTGCTAAGGCTCTTGGATCATTCAGGAGCAACCCCGCTATTTGA 858 0.4918 MAKHDVEGGSFSAKDYHDPPPAPLIDAEELTQWSFYRALIAEFIATMLFLYITVLTVIGYKSQSDVKAGGDVCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAIMYMVAQCLGAICGVGLVKAFQKAYYNRYGGGANELSEGYSTGVGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVMYNQQKAWDDHWIFWVGPFIGAAIAAFYHQFILRAGAAKALGSFRSNPAI 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01415 285 Pfam Major intrinsic protein 29 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma16g01415 285 PANTHER AQUAPORIN PIP2-4-RELATED 7 282 - -
Gma16g01415 285 SUPERFAMILY Aquaporin-like 29 269 IPR023271 -
Gma16g01415 285 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma16g01415 285 PRINTS Major intrinsic protein family signature 85 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma16g01415 285 PRINTS Major intrinsic protein family signature 122 141 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma16g01415 285 PRINTS Major intrinsic protein family signature 171 189 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma16g01415 285 PRINTS Major intrinsic protein family signature 207 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma16g01415 285 PRINTS Major intrinsic protein family signature 247 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma16g01415 285 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 7 282 IPR034294 -
Gma16g01415 285 ProSitePatterns MIP family signature. 103 111 IPR022357 -
Gma16g01415 285 CDD MIP 37 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma16g01415 285 TIGRFAM MIP: MIP family channel proteins 41 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma16g01415 285 Gene3D Glycerol uptake facilitator protein. 22 285 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01415 Gma-Chr16 33133804 33138104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01415 1 281 Major Intrinsic Protein MIP AT2G37170 84.397 1.12e-178 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01415 K09872 - gmx:100782155 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01415 16 33133804 33138104 Gma02g00668 02 6461108 6464771 GST