Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma16g01409 | ATGGATGAAGATCAAGAGATGGAGAGATTTGGAATGGAGAATGATTATGAGGGTGGCCAATGGATTGGCGGCGAGTTTTACTATAAGAATCGTAAAGAAAAACGCACTCAGACCAAGGATGATGTTCTTTATGGAGTTTTTGCAGATTCTGATGACAATGACGACGATGATTATCCGAGTAGAAAACGGAGGAAAGATTTTTCGAAGAAGCCAGACCTCACCAAGCCTGTGAATTTTGTGTCTACAGGCACTTTTATGCCTAATCAGGAAATTGATAACAAGTCCAAAGAGCAGGATGAGAAAGACGGTTATGTTAGTGAGGATAGGCCAGGGTTAGGTTTAGGTTTTGGTATGGGGTCTGGTTTAGGTTTTAATTCTGGTAATGCTGCGAATGGTTCTAATAGAAATGATGATTCTGATGAGAATGATGATAATAGTTTCTTGCCTACAGCGTTTGGGAAGAAGATTAAGGAGGGGGCGATGAGAAGGGAAAGGGAACGGGAGAGGGAGAGGTTGGAGAAGAAGAGGGGGAAGCATCAGAGTGCAGGTCAAGATGTGTCTGGTGATGTTGGAAAATTCGAGAAGCATACGAAAGGGATAGGATTGAAGCTGTTGGAAAAGATGGGTTATAAAGGAGGCGGGCTTGGAAAGAATGAGCAAGGTATTCTGGCTCCTATTGAGGCGAAATTGAGGGCCAAGAATTCTGGCATTGGGTTTAATGAGTCTAAGGAGACTATGCCGCTGCCTGTTTTGCAGCAAGAGAAAAAGAATGTGCCGGAAATCACCCAACCTGTGGTTGGCAGAATGAAGGAGAGGTTATGGTCAAAGCAAGCAAGGTCGAAGAAGAAAAAGGAGGAACAATATATAACTGCAGAGGAGTTGTTGGCCAGCAAGCAAGAACAAGAGTTGGAGGTTGTTCAGAAGGTTTATGATATGAGGGGGCCACAGGTTCGAGTATTAACAAATTTGTCTGATTTAAATGCCGAGGAGAAAGCAAAAGAAAATGATGTCCCGATGCCAGAACTTCAGCATAATGTTGCGTTAATAGTTCGGTTGGCTGAGGCTGACATCCAAGAGATTGATAGAGATTTGAGGAGAGAGAGGGAGACAGCACTTAGCTTGAAAAATGAAAAAGAGAAGTTAGAAACAGAGACAGTGTTTCAAAAGAAGCAGCTGGATAATATGGAGGAAATAATGAGTGTGTTGGACCGTGTTGGAGAAGAAAACACTTTGGGAACATTAACATTGGATTCTCTGGCTCAATACTTTAGGGACTTACTCAAAAGATCTGCTGATAACTACAAGTTGTGTAACTTGTCATGCATTGCTTGCTCATATGCTCTACCTCTATTTATCAGAGTGTTCCAAGGATGGGATCCTCTTCGAAATCCTTCTCATGGGTTGGAGTTGGTGTCACAGTGGAAGGCATTGCTTGAAGGAGAAGATTATTTTGATATATGGGATGTATCATCACCTTATACTCAATTGGTTTCAGAGGTTGTATTGCCAGCTGTCAGAATATCTGGTATTAATACCTGGCAGGCACGGGATCCTGAGCCAATGTTATGGTTTCTGGAATCGTGGGAAAAGTTACTTCCTTCTTCAGTCCTTGCTACCATATTAGACAATATAGTCATGCCAAAATTATCTAGTGCTGTAGATACTTGGGAACCACACCGTGAGACCATTCCTATTCACACTTGGGTGCATCCATGGCTACCTTTGCTGGGGAACAAGTTGGAGGGTATTTACCAGGTGATTCGTTTTAAATTGAGTACTGTTCTTGGTGCCTGGCACCCAAGTGATGGTTCTGCTTATGCTATATTGTCTCCTTGGAAGACTGTATTTGATTCTGCAAGTTGGGAACAACTTATGCTTCGTTTTATTGTACCGAAGCTGCAGCTTGTCTTGCAAGAGTTCCAGGTGAACCCGGCAAGTCAGAATATTGATCAGTTTTATTGGGTTATGAACTGGGCTTCTGCTATTCCTATTCACCTGATGGTTGATATGATGGATAAATTCTTCTTTGCCAAATGGCTTCAGGTTTTGTATCATTGGTTGTGCTCAAATCCTAATTTCGAAGAAGTTACAAAATGGTATTTGGGATGGAAAGAACTCATTCCAAAAGAACTGTTGGCAAATGAAAGTATCAGATACCAGCTTAATCGCGGTCTTGATATGATGAACCAGGCTGTTGAAGGTATGGAGGTGGTCCAACCTGGTTTAAAAGAGAATATAAGCTATCTTAGGGTACTTGAGCAAAGGCAATTTGAGGCTCAACAGAAAGCAGCAGCCTATACTCAACAGCAAGCTGCTGCTAGCTTGGGTGGTGCGGTCAACGCAGATGGTGCTCATGAATTGAGCTTGAAAGAAGTCATTGAGGCTCATGCTCAGCAACATGGTTTGCTATTCAAGATTAAACCTGGTAGAATGCACAATGGTCATCAAATATATGGGTTTGGTAATGTCAGCATAATAATAGATTCCCTAAATCAAAAGGTATATGCCCAAAATGAAGAAATGTGGTCTTTGGAATCTCTTCATGGTTTGCTAGAGTTGCATAATAAATCCCTTAGTAAAAGACGCTGA | 2589 | 0.4195 | MDEDQEMERFGMENDYEGGQWIGGEFYYKNRKEKRTQTKDDVLYGVFADSDDNDDDDYPSRKRRKDFSKKPDLTKPVNFVSTGTFMPNQEIDNKSKEQDEKDGYVSEDRPGLGLGFGMGSGLGFNSGNAANGSNRNDDSDENDDNSFLPTAFGKKIKEGAMRRERERERERLEKKRGKHQSAGQDVSGDVGKFEKHTKGIGLKLLEKMGYKGGGLGKNEQGILAPIEAKLRAKNSGIGFNESKETMPLPVLQQEKKNVPEITQPVVGRMKERLWSKQARSKKKKEEQYITAEELLASKQEQELEVVQKVYDMRGPQVRVLTNLSDLNAEEKAKENDVPMPELQHNVALIVRLAEADIQEIDRDLRRERETALSLKNEKEKLETETVFQKKQLDNMEEIMSVLDRVGEENTLGTLTLDSLAQYFRDLLKRSADNYKLCNLSCIACSYALPLFIRVFQGWDPLRNPSHGLELVSQWKALLEGEDYFDIWDVSSPYTQLVSEVVLPAVRISGINTWQARDPEPMLWFLESWEKLLPSSVLATILDNIVMPKLSSAVDTWEPHRETIPIHTWVHPWLPLLGNKLEGIYQVIRFKLSTVLGAWHPSDGSAYAILSPWKTVFDSASWEQLMLRFIVPKLQLVLQEFQVNPASQNIDQFYWVMNWASAIPIHLMVDMMDKFFFAKWLQVLYHWLCSNPNFEEVTKWYLGWKELIPKELLANESIRYQLNRGLDMMNQAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAAAYTQQQAAASLGGAVNADGAHELSLKEVIEAHAQQHGLLFKIKPGRMHNGHQIYGFGNVSIIIDSLNQKVYAQNEEMWSLESLHGLLELHNKSLSKRR | 862 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma16g01409 | 862 | Coils | Coil | 749 | 769 | - | - | |
Gma16g01409 | 862 | Coils | Coil | 162 | 182 | - | - | |
Gma16g01409 | 862 | MobiDBLite | consensus disorder prediction | 39 | 192 | - | - | |
Gma16g01409 | 862 | MobiDBLite | consensus disorder prediction | 156 | 182 | - | - | |
Gma16g01409 | 862 | MobiDBLite | consensus disorder prediction | 75 | 91 | - | - | |
Gma16g01409 | 862 | Pfam | Tuftelin interacting protein N terminal | 4 | 102 | IPR022159 | - | |
Gma16g01409 | 862 | Coils | Coil | 350 | 398 | - | - | |
Gma16g01409 | 862 | ProSiteProfiles | G-patch domain profile. | 197 | 242 | IPR000467 | GO:0003676 | |
Gma16g01409 | 862 | PANTHER | TUFTELIN-INTERACTING PROTEIN 11-RELATED | 7 | 848 | IPR045211 | GO:0000390 | |
Gma16g01409 | 862 | MobiDBLite | consensus disorder prediction | 92 | 107 | - | - | |
Gma16g01409 | 862 | Pfam | G-patch domain | 197 | 238 | IPR000467 | GO:0003676 | |
Gma16g01409 | 862 | PIRSF | TFIP11 | 1 | 857 | IPR024933 | - | |
Gma16g01409 | 862 | PANTHER | TUFTELIN-INTERACTING PROTEIN 11 | 7 | 848 | - | - | |
Gma16g01409 | 862 | SMART | G-patch_5 | 195 | 240 | IPR000467 | GO:0003676 | |
Gma16g01409 | 862 | Coils | Coil | 281 | 301 | - | - | |
Gma16g01409 | 862 | MobiDBLite | consensus disorder prediction | 55 | 72 | - | - | |
Gma16g01409 | 862 | Pfam | GC-rich sequence DNA-binding factor-like protein | 416 | 683 | IPR022783 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma16g01409 | Gma-Chr16 | 33097611 | 33103527 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma16g01409 | 197 | 241 | C2H2 Transcription Factor Family | AT5G26610 | 48.889 | 2.53e-07 | 51.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma16g01409 | K13103 | - | gmx:100781621 | 1639.01 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma16g01409 | 16 | 33097611 | 33103527 | Gma02g00662 | 02 | 6433279 | 6436360 | GST |