Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01409 ATGGATGAAGATCAAGAGATGGAGAGATTTGGAATGGAGAATGATTATGAGGGTGGCCAATGGATTGGCGGCGAGTTTTACTATAAGAATCGTAAAGAAAAACGCACTCAGACCAAGGATGATGTTCTTTATGGAGTTTTTGCAGATTCTGATGACAATGACGACGATGATTATCCGAGTAGAAAACGGAGGAAAGATTTTTCGAAGAAGCCAGACCTCACCAAGCCTGTGAATTTTGTGTCTACAGGCACTTTTATGCCTAATCAGGAAATTGATAACAAGTCCAAAGAGCAGGATGAGAAAGACGGTTATGTTAGTGAGGATAGGCCAGGGTTAGGTTTAGGTTTTGGTATGGGGTCTGGTTTAGGTTTTAATTCTGGTAATGCTGCGAATGGTTCTAATAGAAATGATGATTCTGATGAGAATGATGATAATAGTTTCTTGCCTACAGCGTTTGGGAAGAAGATTAAGGAGGGGGCGATGAGAAGGGAAAGGGAACGGGAGAGGGAGAGGTTGGAGAAGAAGAGGGGGAAGCATCAGAGTGCAGGTCAAGATGTGTCTGGTGATGTTGGAAAATTCGAGAAGCATACGAAAGGGATAGGATTGAAGCTGTTGGAAAAGATGGGTTATAAAGGAGGCGGGCTTGGAAAGAATGAGCAAGGTATTCTGGCTCCTATTGAGGCGAAATTGAGGGCCAAGAATTCTGGCATTGGGTTTAATGAGTCTAAGGAGACTATGCCGCTGCCTGTTTTGCAGCAAGAGAAAAAGAATGTGCCGGAAATCACCCAACCTGTGGTTGGCAGAATGAAGGAGAGGTTATGGTCAAAGCAAGCAAGGTCGAAGAAGAAAAAGGAGGAACAATATATAACTGCAGAGGAGTTGTTGGCCAGCAAGCAAGAACAAGAGTTGGAGGTTGTTCAGAAGGTTTATGATATGAGGGGGCCACAGGTTCGAGTATTAACAAATTTGTCTGATTTAAATGCCGAGGAGAAAGCAAAAGAAAATGATGTCCCGATGCCAGAACTTCAGCATAATGTTGCGTTAATAGTTCGGTTGGCTGAGGCTGACATCCAAGAGATTGATAGAGATTTGAGGAGAGAGAGGGAGACAGCACTTAGCTTGAAAAATGAAAAAGAGAAGTTAGAAACAGAGACAGTGTTTCAAAAGAAGCAGCTGGATAATATGGAGGAAATAATGAGTGTGTTGGACCGTGTTGGAGAAGAAAACACTTTGGGAACATTAACATTGGATTCTCTGGCTCAATACTTTAGGGACTTACTCAAAAGATCTGCTGATAACTACAAGTTGTGTAACTTGTCATGCATTGCTTGCTCATATGCTCTACCTCTATTTATCAGAGTGTTCCAAGGATGGGATCCTCTTCGAAATCCTTCTCATGGGTTGGAGTTGGTGTCACAGTGGAAGGCATTGCTTGAAGGAGAAGATTATTTTGATATATGGGATGTATCATCACCTTATACTCAATTGGTTTCAGAGGTTGTATTGCCAGCTGTCAGAATATCTGGTATTAATACCTGGCAGGCACGGGATCCTGAGCCAATGTTATGGTTTCTGGAATCGTGGGAAAAGTTACTTCCTTCTTCAGTCCTTGCTACCATATTAGACAATATAGTCATGCCAAAATTATCTAGTGCTGTAGATACTTGGGAACCACACCGTGAGACCATTCCTATTCACACTTGGGTGCATCCATGGCTACCTTTGCTGGGGAACAAGTTGGAGGGTATTTACCAGGTGATTCGTTTTAAATTGAGTACTGTTCTTGGTGCCTGGCACCCAAGTGATGGTTCTGCTTATGCTATATTGTCTCCTTGGAAGACTGTATTTGATTCTGCAAGTTGGGAACAACTTATGCTTCGTTTTATTGTACCGAAGCTGCAGCTTGTCTTGCAAGAGTTCCAGGTGAACCCGGCAAGTCAGAATATTGATCAGTTTTATTGGGTTATGAACTGGGCTTCTGCTATTCCTATTCACCTGATGGTTGATATGATGGATAAATTCTTCTTTGCCAAATGGCTTCAGGTTTTGTATCATTGGTTGTGCTCAAATCCTAATTTCGAAGAAGTTACAAAATGGTATTTGGGATGGAAAGAACTCATTCCAAAAGAACTGTTGGCAAATGAAAGTATCAGATACCAGCTTAATCGCGGTCTTGATATGATGAACCAGGCTGTTGAAGGTATGGAGGTGGTCCAACCTGGTTTAAAAGAGAATATAAGCTATCTTAGGGTACTTGAGCAAAGGCAATTTGAGGCTCAACAGAAAGCAGCAGCCTATACTCAACAGCAAGCTGCTGCTAGCTTGGGTGGTGCGGTCAACGCAGATGGTGCTCATGAATTGAGCTTGAAAGAAGTCATTGAGGCTCATGCTCAGCAACATGGTTTGCTATTCAAGATTAAACCTGGTAGAATGCACAATGGTCATCAAATATATGGGTTTGGTAATGTCAGCATAATAATAGATTCCCTAAATCAAAAGGTATATGCCCAAAATGAAGAAATGTGGTCTTTGGAATCTCTTCATGGTTTGCTAGAGTTGCATAATAAATCCCTTAGTAAAAGACGCTGA 2589 0.4195 MDEDQEMERFGMENDYEGGQWIGGEFYYKNRKEKRTQTKDDVLYGVFADSDDNDDDDYPSRKRRKDFSKKPDLTKPVNFVSTGTFMPNQEIDNKSKEQDEKDGYVSEDRPGLGLGFGMGSGLGFNSGNAANGSNRNDDSDENDDNSFLPTAFGKKIKEGAMRRERERERERLEKKRGKHQSAGQDVSGDVGKFEKHTKGIGLKLLEKMGYKGGGLGKNEQGILAPIEAKLRAKNSGIGFNESKETMPLPVLQQEKKNVPEITQPVVGRMKERLWSKQARSKKKKEEQYITAEELLASKQEQELEVVQKVYDMRGPQVRVLTNLSDLNAEEKAKENDVPMPELQHNVALIVRLAEADIQEIDRDLRRERETALSLKNEKEKLETETVFQKKQLDNMEEIMSVLDRVGEENTLGTLTLDSLAQYFRDLLKRSADNYKLCNLSCIACSYALPLFIRVFQGWDPLRNPSHGLELVSQWKALLEGEDYFDIWDVSSPYTQLVSEVVLPAVRISGINTWQARDPEPMLWFLESWEKLLPSSVLATILDNIVMPKLSSAVDTWEPHRETIPIHTWVHPWLPLLGNKLEGIYQVIRFKLSTVLGAWHPSDGSAYAILSPWKTVFDSASWEQLMLRFIVPKLQLVLQEFQVNPASQNIDQFYWVMNWASAIPIHLMVDMMDKFFFAKWLQVLYHWLCSNPNFEEVTKWYLGWKELIPKELLANESIRYQLNRGLDMMNQAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAAAYTQQQAAASLGGAVNADGAHELSLKEVIEAHAQQHGLLFKIKPGRMHNGHQIYGFGNVSIIIDSLNQKVYAQNEEMWSLESLHGLLELHNKSLSKRR 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01409 862 Coils Coil 749 769 - -
Gma16g01409 862 Coils Coil 162 182 - -
Gma16g01409 862 MobiDBLite consensus disorder prediction 39 192 - -
Gma16g01409 862 MobiDBLite consensus disorder prediction 156 182 - -
Gma16g01409 862 MobiDBLite consensus disorder prediction 75 91 - -
Gma16g01409 862 Pfam Tuftelin interacting protein N terminal 4 102 IPR022159 -
Gma16g01409 862 Coils Coil 350 398 - -
Gma16g01409 862 ProSiteProfiles G-patch domain profile. 197 242 IPR000467 GO:0003676
Gma16g01409 862 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 7 848 IPR045211 GO:0000390
Gma16g01409 862 MobiDBLite consensus disorder prediction 92 107 - -
Gma16g01409 862 Pfam G-patch domain 197 238 IPR000467 GO:0003676
Gma16g01409 862 PIRSF TFIP11 1 857 IPR024933 -
Gma16g01409 862 PANTHER TUFTELIN-INTERACTING PROTEIN 11 7 848 - -
Gma16g01409 862 SMART G-patch_5 195 240 IPR000467 GO:0003676
Gma16g01409 862 Coils Coil 281 301 - -
Gma16g01409 862 MobiDBLite consensus disorder prediction 55 72 - -
Gma16g01409 862 Pfam GC-rich sequence DNA-binding factor-like protein 416 683 IPR022783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01409 Gma-Chr16 33097611 33103527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01409 197 241 C2H2 Transcription Factor Family AT5G26610 48.889 2.53e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01409 K13103 - gmx:100781621 1639.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01409 16 33097611 33103527 Gma02g00662 02 6433279 6436360 GST