Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01388 ATGTACTATCAGCAGCAGCAACAAGCTAAGAACATGCATGCTTTAAGGATGCACAGCCCCACTGAGAGGCATATGATGTTGCAAGGAGGCAATGGAGCTGGTGATCCAGGACTTGTTCTCTCAACTGATGCTAAGCCTAGACTAAAATGGACACCAGATCTTCATGAAAGGTTCATCGAAGCAGTCAATCAACTCGGAGGAGCAGACAAAGCTACACCAAAAACAGTACTGAAACTAATGGGGATTCCTGGACTTACTCTCTACCACTTAAAGAGTCATCTACAGAAGTACAGGATCAGTAAAAATATGCATGGACAAACCAATACTAGCAACAATAAAATTGCATCAACCATGGAAGCAGCAACCGGAATTTCAGAAGCAAGTGGAGTTCAAATGAAACATTTAAGCATAGGCCTCCAGACAAACAAAAATTCAGAAATAAATGATGCATTACAGATGCAAATTGAAGTACAAAGAAGACTACATGAGCAGCTTGAGCAGGTACAGAGACACTTACAGCTAAGGATAGAGGCACAAGGGAAGTACCTTCAGGCAGTGTTGGAAAAAGCACAAGAGACACTAGGAAGACAAAATTTAGGCGCTGAGGGAGTTGAAGCAGCCAAAGTTCAACTATCTGAACTGGCATCCAGAGTATCCCCTCAAAGCCTTGACTCTAAATTTTCAGAACTGAAAGAATTGCAGGTTTTGTGGCCTCAACAAACACAAGAAGGCCAAGCCACTGATTGTTCAATGGGAAGTTTCTTAAACTATAGTGAGGAATCTCAAAGAGACAGAGAAACACATAGCATGAACCTGAATTTGAGAGCCTGTAATGGCCCTCCATTTTCAGTTTCAAAAGGGTGTGCAGAAGAGTCTATGCATTTAAAGCCTGATTACAGATTGTGTGATGAAGTAAAGGAGAATATGATGTTTCTTTCCTCATCAAGTAATAGTAAAGTAGTGAAGGGTGATTTTTTATCAGAGAGGCCATCAAGCCTCTTGTCCATGAATGTAGGAGTTCAAGAAGAAGAAAATTTTGGTAGAACAACGGTTCCAAAGGAAGAAGGTTGGAAGAGAAGAGAGAGCACTGAAACTGGAAGAGTGCCAGTTAAATTGAACTACGAGAAGATTTCTCAAGATTATAGACTTGCAAACTTTGATGTGAAACTGGACCTGAATTCCCATGATGATAATGATGCTTCTTCCCACTGCCAACAGTTTGATTTGAACGGTTTCAGCTGGAATTGCTAG 1251 0.4101 MYYQQQQQAKNMHALRMHSPTERHMMLQGGNGAGDPGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVLKLMGIPGLTLYHLKSHLQKYRISKNMHGQTNTSNNKIASTMEAATGISEASGVQMKHLSIGLQTNKNSEINDALQMQIEVQRRLHEQLEQVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGAEGVEAAKVQLSELASRVSPQSLDSKFSELKELQVLWPQQTQEGQATDCSMGSFLNYSEESQRDRETHSMNLNLRACNGPPFSVSKGCAEESMHLKPDYRLCDEVKENMMFLSSSSNSKVVKGDFLSERPSSLLSMNVGVQEEENFGRTTVPKEEGWKRRESTETGRVPVKLNYEKISQDYRLANFDVKLDLNSHDDNDASSHCQQFDLNGFSWNC 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01388 416 Pfam Myb-like DNA-binding domain 47 98 IPR001005 -
Gma16g01388 416 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 415 IPR044848 GO:0003700
Gma16g01388 416 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 45 100 IPR006447 GO:0003677
Gma16g01388 416 Coils Coil 148 168 - -
Gma16g01388 416 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 102 IPR017930 -
Gma16g01388 416 Gene3D - 44 103 - -
Gma16g01388 416 SUPERFAMILY Homeodomain-like 44 100 IPR009057 -
Gma16g01388 416 Pfam MYB-CC type transfactor, LHEQLE motif 146 193 IPR025756 -
Gma16g01388 416 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 4 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01388 Gma-Chr16 32905076 32908126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01388 77 415 G2-like Transcription Factor Family AT3G04030 47.941 1.90e-83 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma16g01388 Myb_DNA-binding 4.9e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01388 - - gmx:100789797 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01388 16 32905076 32908126 Gma02g00640 02 6280248 6282750 GST