Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01383 ATGGGAACCCCACAATCCAATAACTTGCCACCAGGGTTTAGGTTCCACCCTACAGATGAAGAGCTCATTCTTCACTACCTAAGGAAGAAGGTTGCCTCCATTCCTTTGCCAGTTGCCATCATTGCTGAGGTTGATATCTACAAGTTTGATCCATGGGAGCTACCAGCTAAGGCCGCGTTTGGGGAGAAAGAGTGGTACTTCTTCAGTCCTAGAGACCGGAAGTACCCAAATGGAGCGAGGCCAAACAGGGCAGCAGCTTCAGGGTATTGGAAGGCCACAGGCACTGATAAGAACATAGTGGCATCACTGGCAGGAGGAGTGAGGGAGCACTTTGGTGTGAAGAAGGCTTTGGTGTTCTACAAAGGAAAACCCCCAAAGGGTGTCAAAACCAATTGGATCATGCATGAATATCGCCTTGTTGACACCAATAGACCCATTAGGATCAAAGACACCTCCATGAGGTTGGATGACTGGGTTCTATGCCGGATATACAAGAAGTTCAAGCATGCTGTATCTCCAACCACAGAGGCAGCATCAACACTGCAAGTGATCAATGAGCAATTAGATCAAGCAGTGGTAGAAGAAGAGGAGCAAATCAAAGACACCCTTTTACCAATTTTGAAGAATAACAACACTTTTGTCCCTCCTCCACAAGCCACAATACTCATGTCTCAGAAATCCTTATCCTTCTCAAATCTCTTGGATGCCACAGACTACTCCATGCTTAGCACCATCTTATCTGAGAACCACTCCAATAATTACCCTACTCCAAGTGAAACCAGCTTATTCAATAATTGTGAGAATCTGGATCAGGAAATTACCCCCCAAAACTACTACATCAACGATACTAATAGTATTAATAATAATAGCTACTTGTTTCAGAAGAACCCTTCCAACATGGAAAACATTGCTAGGCCAAAACGCCACCTTCCAAACATGGATCATGAGGACAACATGTTATTATACCCTTTAAAGAAATATCATAGTTCCTCTTGCAATTTCCCCAACACCAACCTCCAAAACCAGAATCCACAATGGAACTTCATGTTCAAGCAGCCACTCATGAGTCCTCAATATCTTCAATTTCAGTGA 1092 0.4377 MGTPQSNNLPPGFRFHPTDEELILHYLRKKVASIPLPVAIIAEVDIYKFDPWELPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKNIVASLAGGVREHFGVKKALVFYKGKPPKGVKTNWIMHEYRLVDTNRPIRIKDTSMRLDDWVLCRIYKKFKHAVSPTTEAASTLQVINEQLDQAVVEEEEQIKDTLLPILKNNNTFVPPPQATILMSQKSLSFSNLLDATDYSMLSTILSENHSNNYPTPSETSLFNNCENLDQEITPQNYYINDTNSINNNSYLFQKNPSNMENIARPKRHLPNMDHEDNMLLYPLKKYHSSSCNFPNTNLQNQNPQWNFMFKQPLMSPQYLQFQ 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01383 363 Pfam No apical meristem (NAM) protein 10 139 IPR003441 GO:0003677|GO:0006355
Gma16g01383 363 PANTHER OS01G0104200 PROTEIN 5 309 - -
Gma16g01383 363 SUPERFAMILY NAC domain 6 166 IPR036093 GO:0003677|GO:0006355
Gma16g01383 363 ProSiteProfiles NAC domain profile. 9 166 IPR003441 GO:0003677|GO:0006355
Gma16g01383 363 PANTHER NAC TRANSCRIPTION FACTOR 56 5 309 - -
Gma16g01383 363 Gene3D NAC domain 18 170 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01383 Gma-Chr16 32818392 32820781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01383 7 252 NAC Transcription Factor Family AT3G04070 60.000 1.60e-98 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma16g01383 NAM 5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01383 - - gmx:100817074 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01383 16 32818392 32820781 Gma02g00631 02 6193041 6195677 GST