Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01382 ATGGCTAGTGCTATAAAAGCTGCCATTGGAGATTTGGTGTTGACTTTTCTGTGGGTCTTCTTCTCTTCCATGTTGGGATTGGTCACCAACGCCATAACAACAGCGCTTGATCTTCATCACGTGTCTTACAACGGTTTTGATTACCCTTCTGCTGTGATCATCACTTCGCTCATCTTTATCCTCGTTACCATCTTCACGTTCGTTGGCAATGCCTTGGGTGGCGCCAGCTTCAACCCCACCGGCAATGCTTCCTCATACGCTGTCGGGCTCGGCTCCGACACCCTCTTCTCTATGGCTCTACGGTTCCCTGCTCAGGCACTGGGTTCAGTGGGTGGTGTTCTGGCTGTTATGGAGGTTATGCCACCAAAATACAGGCACTTGATTGGAGGGCCTTCTTTGAAGGTTAGCTTGCATACCGGAGCTATTGCAGAGGGGGTGCTGACGTTTGTAATCACCTTTGTTGTTCTACTTATCATGATCAGGGGTCCTCGTAGTGAGGCCGTGAAGACTTTGTTGATGGCAATCTCAACTGTGGTTTTGATCACTGCTGGTTCTGCTTACACGGGACCAGCAATGAATCCTGCCTTTGCATTTGGTTGGGCATACTTTGAAAACTGGCACAACACATGGGACCAATTCTATGTATACTGGATTTGCCCCTTCTTTGGAGCAATACTGGCTGCATGGCTGTTCCGTATTGTCTTTCCCCCAAGAGTGAGAGTGTTGTTCCTCGGGAGTTTCGGCCAAAGACACCAGTTGGAGTTGGGGATTTGTGAATATAAGGTTCGGGATTTGCTTAAGCAAAGAAGCACTCTAAAATCTGAGCTTGATGCAGTAACAGTGCTGGATGGAACACAAGAAGGTGCTTTTCAATGGGTGACTATTCCTTATCTACTGGGAAAATTGGGAAAAGATTTTTCAGAGACTGTTGGGGTAGTTGATCTTGGAGGTTCTTACATTTATGGAGGAAAGTCATATAAGGCTTCATCCACCCCTTCTGGTGCAAGCTTGAATGAATGCAAAAGCATAGCTCTCAAGGCTCTCAAGGTTAATGGGTCAAATAAAAACCTTTTTGTTGCCTCATTTTTCTTTGACCGGGCAGCTGAGGCTGGTTTTGCCGATCCAAACTTACAAGTTGTGAAGGTTTATGCCAAATCCACTTATCAACGTGTTGAGGAAGGGAACCTTCCATATTTATGCATGGATCTCGTATACCAATATACATTGCTTGTTGGATTTGGTCTAGATCCATGGCAACAGATTATTACATTAGTGAAGAAAGTTAGATATCACGATGCTTTTGTTGAAGCTGCATGGTCCCTAGGCAGCACCATAGAAGCTGTATCATCTACATAA 1356 0.455 MASAIKAAIGDLVLTFLWVFFSSMLGLVTNAITTALDLHHVSYNGFDYPSAVIITSLIFILVTIFTFVGNALGGASFNPTGNASSYAVGLGSDTLFSMALRFPAQALGSVGGVLAVMEVMPPKYRHLIGGPSLKVSLHTGAIAEGVLTFVITFVVLLIMIRGPRSEAVKTLLMAISTVVLITAGSAYTGPAMNPAFAFGWAYFENWHNTWDQFYVYWICPFFGAILAAWLFRIVFPPRVRVLFLGSFGQRHQLELGICEYKVRDLLKQRSTLKSELDAVTVLDGTQEGAFQWVTIPYLLGKLGKDFSETVGVVDLGGSYIYGGKSYKASSTPSGASLNECKSIALKALKVNGSNKNLFVASFFFDRAAEAGFADPNLQVVKVYAKSTYQRVEEGNLPYLCMDLVYQYTLLVGFGLDPWQQIITLVKKVRYHDAFVEAAWSLGSTIEAVSST 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01382 451 Pfam Major intrinsic protein 3 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma16g01382 451 Pfam GDA1/CD39 (nucleoside phosphatase) family 261 362 IPR000407 GO:0016787
Gma16g01382 451 Pfam GDA1/CD39 (nucleoside phosphatase) family 381 450 IPR000407 GO:0016787
Gma16g01382 451 PANTHER AQUAPORIN SIP1-1 3 238 - -
Gma16g01382 451 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma16g01382 451 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma16g01382 451 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma16g01382 451 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma16g01382 451 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma16g01382 451 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma16g01382 451 PANTHER AQUAPORIN SIP1-1 3 238 IPR044222 GO:0015250
Gma16g01382 451 SUPERFAMILY Aquaporin-like 4 241 IPR023271 -
Gma16g01382 451 Gene3D Glycerol uptake facilitator protein. 1 242 IPR023271 -
Gma16g01382 451 Gene3D Exopolyphosphatase. Domain 2 283 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01382 Gma-Chr16 32800309 32808493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01382 3 236 Major Intrinsic Protein MIP AT5G18290 54.043 5.16e-77 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01382 K09875 - gmx:100788738 472.626