Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01377 ATGGACGCGAGCTTCCACAAGCTCCACATCAAAAAGCTCAGCATCGGAGACGTTCAACGCCTCGAGTGGGAGCAGTTTGAGAACAAAATCAGACACTGGATAAAAGCCGCCAAGGTCTGCGTTAGAATTCTCTTCGCAAGCGAGAAGAAGCTCTGCGAGCAAATCTTCGACAACATCGGAACTTCCATCGACAATGCTTGCTTCATGGAGACAGTGAAATATCCTGCGATTCAGCTCTTCAAGAGAATATCTACAGCCCACTGA 264 0.4811 MDASFHKLHIKKLSIGDVQRLEWEQFENKIRHWIKAAKVCVRILFASEKKLCEQIFDNIGTSIDNACFMETVKYPAIQLFKRISTAH 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01377 87 Gene3D Exocyst complex component Exo70 1 86 - -
Gma16g01377 87 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 2 81 - -
Gma16g01377 87 SUPERFAMILY Cullin repeat-like 1 84 IPR016159 -
Gma16g01377 87 Pfam Exo70 exocyst complex subunit 32 84 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gma16g01377 87 PANTHER EXOCYST COMPLEX PROTEIN EXO70 2 81 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01377 Gma-Chr16 32735543 32739749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01377 1 80 EXO70 exocyst subunit family AT1G72470 66.667 3.98e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01377 K07195 - gmx:100812980 145.591