Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01371 ATGACAAGAAGCAAGCACCAACGTGAATACCCTAATTCGGAGGGTTTCAGTTTTCGCCCTCTTTTCTCATCTCCAACATCTTCGTCGTCACGGAGGCTAGTCTTCCTGTTATCACAAACAATGTCTGACGGTCAAGAATCAGACAAGAATATTGAGATATGGAAGATCAAGAAATTGATAAAGGCATTGGAAGCTGCTCGAGGTAATGGTACCAGCATGATTTCTCTGATAATGCCTCCACGTGATCAAATATCTCGGGTCACTAAGATGTTGGGAGATGAATTTGGAACTGCTTCAAACATCAAAAGTAGGGTGAACCGACAGTCTGTGTTGGGAGCCATTACTTCTGCTCAGCAGAGGTTGAAACTATATAACAAGGTCCCTCCAAATGGTTTGGTTCTTTACACTGGAACCATTGTCACTGAAGATGGCAAGGAAAAGAAGGTGACAATTGATTTTGAGCCTTTCAAGCCTATCAATGCATCACTGTACCTCTGTGATAACAAGTTTCACACAGAAGCTCTAAATGAACTTTTAGAATCTGATGACAAGTTTGGTTTCATTGTGATGGATGGAAATGGCACCCTTTTTGGGACTTTAAGTGGAAACACTCGTGAGGTACTTCACAAATTTACTGTTGATCTACCAAAGAAGCATGGTAGAGGAGGTCAATCAGCTTTGCGTTTTGCTCGTCTTAGGATGGAAAAGCGGCACAACTATGTTAGGAAAACAGCAGAATATGCTACTCAGTATTTCATCAATACTGCCACCAGTCAACCTAATGTTTCTGGACTTATACTTGCTGGTTCTGCTGACTTCAAGACTGAGCTAAGTCAGTCAGATATGTTTGACCCTCGATTGCAAGCAAAAATATTAAATGTGGTAGATGTTTCTTATGGTGGGGAAAATGGATTCAATCAAGCTATTGAGCTATCTGCTGAGATTTTATCAAATGTGAAGTTCATTCAAGAGAAACGCTTGATAGGGAAATATTTTGAAGAGATCAGCCAGGACACTGGGAAATATGTCTTTGGGGTTGAGGACACTTTGAAGGCACTGGAGATGGGTGCTGTGGAAACACTCATTGTATGGGAAAATTTGGATATTAATAGGTATGTGCTGAAAAATGGTACTACTAGTGAGATTATCATAAAACACTTGAACAAGGAACAAGATGCTGATCAAAGCAACTTCCGTGATTCAGCCACCTCTGCAGAGTTGGAAGTTCAGGAGAAGATGCCCTTGCTTGAGTGGTTTGCCAATGAGTACAAAAAATTTGGATGCTCCTTGGAATTTGTGACCAACAAATCTCAAGAGGGGTCACAATTCTGCAGAGGGTTTGGTGGCATTGGTGGAATTCTTCGTTACCAGCTTGACATCAGATCATTTGATGAGTTATCTGATGATGAAGTGTATGAGGATTCTGATTAA 1431 0.4095 MTRSKHQREYPNSEGFSFRPLFSSPTSSSSRRLVFLLSQTMSDGQESDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAEYATQYFINTATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVEDTLKALEMGAVETLIVWENLDINRYVLKNGTTSEIIIKHLNKEQDADQSNFRDSATSAELEVQEKMPLLEWFANEYKKFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSFDELSDDEVYEDSD 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01371 476 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 46 180 IPR024049 -
Gma16g01371 476 SUPERFAMILY L30e-like 318 460 IPR029064 -
Gma16g01371 476 Pfam eRF1 domain 2 184 317 IPR005141 -
Gma16g01371 476 Gene3D eRF1 domain 2 176 317 IPR042226 -
Gma16g01371 476 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 41 476 - -
Gma16g01371 476 Pfam eRF1 domain 1 58 178 IPR005140 -
Gma16g01371 476 SUPERFAMILY Translational machinery components 182 316 - -
Gma16g01371 476 SMART eRF1_1_2 44 180 IPR005140 -
Gma16g01371 476 MobiDBLite consensus disorder prediction 1 27 - -
Gma16g01371 476 Gene3D - 319 476 IPR029064 -
Gma16g01371 476 Gene3D eRF1 domain 1 38 175 IPR024049 -
Gma16g01371 476 Pfam eRF1 domain 3 321 458 IPR005142 -
Gma16g01371 476 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 41 476 IPR004403 GO:0003747|GO:0006415
Gma16g01371 476 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 52 457 IPR004403 GO:0003747|GO:0006415
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01371 Gma-Chr16 32659996 32668410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01371 41 476 Eukaryotic Initiation Factors Gene Family AT3G26618 91.514 0.0 831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01371 K03265 - gmx:100813343 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01371 16 32659996 32668410 Gma02g00616 02 6069125 6073490 GST
Gma19g01047 19 38274391 38275311 Gma16g01371 16 32659996 32668410 PCT
Gma16g00402 16 4277756 4280446 Gma16g01371 16 32659996 32668410 PCT
Gma16g01371 16 32659996 32668410 Gma19g01047 19 38274391 38275311 PCT
Gma16g01371 16 32659996 32668410 Gma16g00402 16 4277756 4280446 PCT