Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01357 ATGGTAAGCATTTTATCTTCTTACACAGTGATTCCTAGTGAGGCTACACCAAATTGTAGTCTCTTGTTATCTGAGAGTGAGCAAATCAATGCTCCCACTCATTCGCTCACCATCTACGTCTACAAGCCAAATCATCTCAACAAAATTATCCCCAACATGAACATGGTTGATACAATGAGAGACTCTCTTGCCAAGATCTTAGTCCACTATTACCCACTAGCTGGCCGGCTACGCATGATACAAGGTAGAAGATGGGAAGTGGAGTGCAATGCAAAGGGTGTGATATTGTTGGAAGCTGAATCCACAAGAGCACTTAATGACTACGCTATCTTTGAACCCAACGACACCATTAAAGAACTTATTCCCAAAGTTGATTACACCGAACCCATTGAGAATTCACCATTGTTTCTAGTGCAGTTGACAAGATTCTCCAATGGTGGCTTCTGTGTTGGCATTGCCATTTCAAACATCATTACTGATGGGATTTCCGGCACTCACTTCATCAACTTGTGGGCAACGTTGGCTCGAGGAGACACCTTGGAGGAACACGACATGCCACTTCTGAACAAAGTGGTTCTTCAAAGTTCGGACAAAAAACCATGCTTTGATCACAAAGAATTCAAGCCATTGCCACTTGTACTAGGTCACGCTGACACCACGGAGGAGAGTAAGAAGGAGACAACAGTTGCAATGTTGAAACTCTCAAGAGAAATGGTGGAGAAGCTTAAGAAGAAAGCCAATGAGGGCAACCAGGGTCGAGCTTATAGCAGATATGAGAGCATTTCGGCTCATATATGGCGATGTGTCGTGAAGGCTCGTGACGGGTATCACAATCAACCAACAGTCGTACACATTATTGCTGGTGCAAGAAACAGATTGAACCCACCTTTACCTTTAAACTACTTTGGAAACGCAACGTATCCAACAGTGACACCGACATGCCTAAGTGGGGACATAGTGTCAAAACCCTTGAGCTACGTGGCTCACAAGATAAGGGAAGCAATTGAAGTGTTAACAGATGAGTATCTAAGGTCAGGGTTTGGTTTTATTAGGAGTCAGAGTGATGTGGGGTGGCTTAGGGAAAAAAATGATAATGAAGGGAAAGTGGAGTCCTTGTTTCTTGGGAACCCTAACCTGAACATTTGGAGCTGGATGAGAAACATGCCAATGTATGGGCCAAATTTTGGGTGGGGGAGGCCTGTGTATATGGGCCCAGGTGTTGTGAAAGGGGATGGAAGGGCATTCATTATGCCAGGTCAAGAGGATGGGTCTGTTTTAGTGGCTATTAGGTTGCAAAGTGCTCATGTTGAAGCCTTTAAGGAGGTCTTCCACAAGGACATGTGA 1344 0.4449 MVSILSSYTVIPSEATPNCSLLLSESEQINAPTHSLTIYVYKPNHLNKIIPNMNMVDTMRDSLAKILVHYYPLAGRLRMIQGRRWEVECNAKGVILLEAESTRALNDYAIFEPNDTIKELIPKVDYTEPIENSPLFLVQLTRFSNGGFCVGIAISNIITDGISGTHFINLWATLARGDTLEEHDMPLLNKVVLQSSDKKPCFDHKEFKPLPLVLGHADTTEESKKETTVAMLKLSREMVEKLKKKANEGNQGRAYSRYESISAHIWRCVVKARDGYHNQPTVVHIIAGARNRLNPPLPLNYFGNATYPTVTPTCLSGDIVSKPLSYVAHKIREAIEVLTDEYLRSGFGFIRSQSDVGWLREKNDNEGKVESLFLGNPNLNIWSWMRNMPMYGPNFGWGRPVYMGPGVVKGDGRAFIMPGQEDGSVLVAIRLQSAHVEAFKEVFHKDM 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01357 447 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 6 447 - -
Gma16g01357 447 Gene3D - 215 445 IPR023213 -
Gma16g01357 447 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 447 - -
Gma16g01357 447 Pfam Transferase family 1 443 - -
Gma16g01357 447 Gene3D - 1 209 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01357 Gma-Chr16 32507155 32509811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01357 2 445 Monolignol Biosynthesis Gene Families AT5G48930 35.202 6.18e-96 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01357 K13065 - gmx:100779652 912.524