Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01336 ATGGCAATCCACTTTTGGATTTGCCTATATCCACACCACTCTCCTATATTCTCTTGTGTTGTTGAGATTCTAAAAATTGCCAGTTACATTCCCTTCACAAGATTCTCACAAACAACTCTTGAGAAAGAAAGAATGGCTGCCAACACATTGATGAGTTCTGCCATCTCAGCCTTCCCATCTCTCCTTTCCTCCTCAAAATCCAGATTTGCCGCAGCAGTTCCTCTTTCCAGCTTTGTTGTCACCAATGCCTCTTCTTCTCGCTTTTCCATGAGTGCTGATTGGATGCCTGGCCAGCCTAGACCCCCCTACCTTGATGGTTCAGCACCTGGTGACTTTGGATTCGACCCTCTTCGTCTTGGTGAAGTACCAGAGAATCTTGAGAGGTTCAAAGAGTCAGAACTCATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTTCCAGAGGCATTGGGCTTAGGCAACTGGGTAAAGGCTCAGGAATGGGCTGCAGTTCCTGGTGGCCAAGCAACCTACCTAGGCAGCCCAGTTCCATGGGGCACCCTACCCACCATTCTGGCCATTGAATTCCTTGCTATTTCCTTCGTGGAGCACCAAAGGAGCATGGAGAAGGACCCTGAAAAGAAGAAATACCCTGGTGGTGCTTTTGATCCTTTGGGATACTCTAAGGACCCTAAAACATTCCACGAATACAAAGTCAAAGAAATTAAAAATGGACGTCTTGCTTTGTTGGCTTTTGTGGGATTCTGTGTTCAACAATCAGCTTATCCCGGCACTGGACCTTTGGAGAACTTGGCTGCTCACTTGGCTGACCCATGGCACAACAACATTGGAAACGTCATTATTCCACAATCGATTTTGCCTTGA 873 0.4708 MAIHFWICLYPHHSPIFSCVVEILKIASYIPFTRFSQTTLEKERMAANTLMSSAISAFPSLLSSSKSRFAAAVPLSSFVVTNASSSRFSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGSPVPWGTLPTILAIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKTFHEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLAAHLADPWHNNIGNVIIPQSILP 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01336 290 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 65 280 IPR001344 GO:0009765|GO:0016020
Gma16g01336 290 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 65 280 - -
Gma16g01336 290 Gene3D Chlorophyll a/b binding protein domain 95 281 - -
Gma16g01336 290 SUPERFAMILY Chlorophyll a-b binding protein 85 284 - -
Gma16g01336 290 Pfam Chlorophyll A-B binding protein 101 255 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01336 Gma-Chr16 32282518 32284914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01336 45 242 Chloroplast and Mitochondria Gene Families AT3G54890 80.000 3.17e-106 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01336 K08907 - gmx:100800350 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01336 16 32282518 32284914 Gma02g00580 02 5819750 5822481 GST