Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01311 ATGGGAATAGCAACACCTTCTTCATCGCTTCCTTCTATTCTCTCTCACTCGAAGACACACCAACAACAAATACATCATTCGAATTCTATGTCCCAAGATTACCACCACCACCACCACCAAGGAATCTTCAGCTTCCCTAATGGGTTCGAAAGATCGGCGGCTACTACGATGACTCACCAAGACCCTCACCACCACCACCACCATCACCACCAGCAACAGCAGATTCGGAGGGACAAAGTGAGGGTGCAAGGCTTCGAGCCGCCACCGCAACAAACTTTGCTACCTATAGAGGAAGACGAATCGGGGAGCCTCCCGGTGTACGAAACCGCCGGAATGTTATCGGAGATGTTCAATTTCCCTCCCGGCGCCgctgaattattggaacagcaacagcagcagcaacaacaacaacCAATGGCGATGACGACGACATTTCGGGCATCGCCGTCGGCCAGGGCAGTGGGCAGTGGTGGCAGTGAGTGGTACGGAAACAGACAAGGGATGCTAAGCGGGTTGGGACCGTTGGGAGATTCCAAGAATCATCATCATCATCATGGCAGTGTGAATAGCCGTGACAGTAGCAGCAGCAGCATAGTTCAGAATCAGCATCATCATCATCACAACCACCAGCATCATCAGATGTCGAGCATTAATGCAGACTCTGCAGCTGCCATGCAGCTTTTTCTCATGAACCCTCAAACCACCAGATCCCCTTCTCCCCCTCCACCTCCACCTCCTCCTCCTTCTTCTACTCTCCACATGCTGCTTCCTACTTTCCCTCCAGGCTCAGGAGGGTCTTTCAGTCAATTCACGTGGCTTCCCGACACCACTCAAGAAGGAGGAGGACCGAGCACAGAAGGCCCTGGTCATGGCCAGGGCCTTTCCCTGTCCTTGTCCTCCTCCTTAGAAGCCGCAAAGGCTGAGGAACTAAGGATGGGGAACAGTGGGTTTTTGTATTACAATCAAGCAAGTGGAGGACCCTCTTCTTATAAGAGTACTCTTGGGGGTCATCACCACCAAGCATTGTTGGCACAGACCCACCAGGGACATGTTGGGTTTGGGGCAGCATCATCGTCTACATCATCCTTAGGTGTTGTGAATGCGTTGAGGAATTCAAAATATGCCAAAGCTGCTCAGGAATTGCTTGAAGAGTTTTGCAGTGTTGGGAGAGGCCAGTTCAAGAAGAACAAGTTCAATAGGCAACTCTCAAACCCTAGTTCCAATCTTCGAGGTAGCGGCGGCGGTGCTTCTTCGTCTTCCTCAAAGGATGTTCCTCCTTTGTCAGCAGCTGATAGAATTGAGCATCAAAGGAGGAAGGTCAAACTCCTAACCATGCTTGACGAGGTGGATCGGAGATACAGCCACTACTGCGAGCAAATGCACATGGTGGTGAACGCATTCGACATGGTGATGGGGTTTGGCGCCGCGGTGCCATACACGGCGCTGGCACAGAAAGCAATGTCTCGTCACTTTAGGTGCCTAAAGGATGCGATAACAGCACAATTGAAGCATAGTTGTGAGGTATTGGGAGAGAAAGATGGTGCAGGGAATTCGGGGTTGACAAAAGGAGAGACCCCAAGGCTGAAGATGCTGGAACAAAGCTTGAGGCAGCAAAGAGCGTTTCATCAAATGGGGATGATGGAACAGGAGGCTTGGAGGCCCCAGAGAGGGTTGCCAGAACGATCTGTCAACATTTTGAGAGCCTGGCTTTTCGAGCATTTCCTTCATCCGTACCCAAGCGATGCAGATAAGCATCTGTTGGCACGACAGACTGGGCTATCGAGAAATCAGGTATCAAACTGGTTCATTAATGCGAGGGTTCGTTTGTGGAAACCCATGGTGGAAGACATGTACCAACAAGAACTCAAAGAGGCCGAAGGGGCAGAAGAAGAGAGGGAGGGGAACCAAAGCAGTAGCAACAACAGTGGCCACCAATTGGCACAAACTCCAACACCCTCAACCACCGCATCGACGGCAACAGCGCCACCACCACCAACAACGACACCACCAACCGGAAAAAGATCCGATTCTGAAAGCGACCCTTCACTTGCACCAATAAATAACACCACCAGCACTGCTGCCATGACCGTCACCGCCTCTGAGGTGACGCAACTGTCGGAGCTGCCCCGAACAATGGTGGCCGATGAATCTTGTAGGCATGGTAGCCTTGTTGCAACGGAGTTTGGGACCGCTTCTGCTGCTTCTGAAATTGGTTCCACTCTGATCAGGTTTGGGACCACCGCCGGTGACGTGTCACTCACGCTAGGGCTTCGCCACGCCGGGAACATGCCGGAGAAAACTCCGTTCTCCGTTAGGGACTTTGGAGGCATTTAA 2334 0.5103 MGIATPSSSLPSILSHSKTHQQQIHHSNSMSQDYHHHHHQGIFSFPNGFERSAATTMTHQDPHHHHHHHHQQQQIRRDKVRVQGFEPPPQQTLLPIEEDESGSLPVYETAGMLSEMFNFPPGAAELLEQQQQQQQQQPMAMTTTFRASPSARAVGSGGSEWYGNRQGMLSGLGPLGDSKNHHHHHGSVNSRDSSSSSIVQNQHHHHHNHQHHQMSSINADSAAAMQLFLMNPQTTRSPSPPPPPPPPPSSTLHMLLPTFPPGSGGSFSQFTWLPDTTQEGGGPSTEGPGHGQGLSLSLSSSLEAAKAEELRMGNSGFLYYNQASGGPSSYKSTLGGHHHQALLAQTHQGHVGFGAASSSTSSLGVVNALRNSKYAKAAQELLEEFCSVGRGQFKKNKFNRQLSNPSSNLRGSGGGASSSSSKDVPPLSAADRIEHQRRKVKLLTMLDEVDRRYSHYCEQMHMVVNAFDMVMGFGAAVPYTALAQKAMSRHFRCLKDAITAQLKHSCEVLGEKDGAGNSGLTKGETPRLKMLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQELKEAEGAEEEREGNQSSSNNSGHQLAQTPTPSTTASTATAPPPPTTTPPTGKRSDSESDPSLAPINNTTSTAAMTVTASEVTQLSELPRTMVADESCRHGSLVATEFGTASAASEIGSTLIRFGTTAGDVSLTLGLRHAGNMPEKTPFSVRDFGGI 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01311 777 MobiDBLite consensus disorder prediction 127 216 - -
Gma16g01311 777 MobiDBLite consensus disorder prediction 127 150 - -
Gma16g01311 777 MobiDBLite consensus disorder prediction 623 693 - -
Gma16g01311 777 MobiDBLite consensus disorder prediction 61 75 - -
Gma16g01311 777 Pfam Associated with HOX 369 499 IPR006563 -
Gma16g01311 777 MobiDBLite consensus disorder prediction 262 283 - -
Gma16g01311 777 MobiDBLite consensus disorder prediction 232 296 - -
Gma16g01311 777 MobiDBLite consensus disorder prediction 634 656 - -
Gma16g01311 777 MobiDBLite consensus disorder prediction 235 254 - -
Gma16g01311 777 MobiDBLite consensus disorder prediction 397 425 - -
Gma16g01311 777 MobiDBLite consensus disorder prediction 671 693 - -
Gma16g01311 777 MobiDBLite consensus disorder prediction 397 431 - -
Gma16g01311 777 MobiDBLite consensus disorder prediction 1 78 - -
Gma16g01311 777 SMART prehox3 363 500 IPR006563 -
Gma16g01311 777 CDD homeodomain 552 613 IPR001356 GO:0003677
Gma16g01311 777 Pfam Homeobox KN domain 569 608 IPR008422 GO:0003677|GO:0006355
Gma16g01311 777 ProSiteProfiles 'Homeobox' domain profile. 549 612 IPR001356 GO:0003677
Gma16g01311 777 SMART HOX_1 552 616 IPR001356 GO:0003677
Gma16g01311 777 Gene3D - 555 617 - -
Gma16g01311 777 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 90 766 - -
Gma16g01311 777 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 90 766 - -
Gma16g01311 777 SUPERFAMILY Homeodomain-like 554 619 IPR009057 -
Gma16g01311 777 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01311 Gma-Chr16 31806142 31814600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01311 363 777 Homeobox Transcription Factor Family AT2G23760 56.329 2.26e-147 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Gma16g01311 POX 6.4e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01311 - - gmx:100814959 1320.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01311 16 31806142 31814600 Gma16g01311 16 31806142 31814600 ECH
Gma02g00548 02 5472504 5479922 Gma16g01311 16 31806142 31814600 ECH
Gma16g01311 16 31806142 31814600 Gma02g00548 02 5472504 5479922 GST
Gma01g01829 01 53907401 53915369 Gma16g01311 16 31806142 31814600 PCT
Gma11g00572 11 4767037 4774964 Gma16g01311 16 31806142 31814600 PCT
Gma16g01311 16 31806142 31814600 Gma01g01829 01 53907401 53915369 PCT
Gma16g01311 16 31806142 31814600 Gma11g00572 11 4767037 4774964 PCT