Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01310 ATGGAGGAAACATCATTCACAGCTTGCCATATGCTCGATGGGCTATTCAGGAAAGATGACAAACAACATTGGTATGGACCTCATCCATTACAAAGTATTGATCCTAGTGATAACTCAATAAAGCCCAAATTTGACCCCTTAAGTTATGGATTTTCTAGGATTCAAGGCAAAGTTTGGATCACCTTCCAAAGAGATATGCACATTGTGCTTGAGAAATCCCTTCTCATTAGCAGTTTCACCACCATCGATGGTCGAGAAATCCCTTCTCATTAG 273 0.4029 MEETSFTACHMLDGLFRKDDKQHWYGPHPLQSIDPSDNSIKPKFDPLSYGFSRIQGKVWITFQRDMHIVLEKSLLISSFTTIDGREIPSH 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01310 90 Gene3D - 27 90 IPR012334 -
Gma16g01310 90 PANTHER PECTATE LYASE 31 88 - -
Gma16g01310 90 PANTHER PECTATE LYASE 18-RELATED 31 88 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01310 Gma-Chr16 31789511 31789783 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01310 34 90 Polysaccharide Lyase AT5G09280 54.386 9.42e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01310 K01728 - gmx:100811216 87.8113