Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01306 ATGAAAAATCCAAGAGAAATGAGAGATAGAGACCTACCTCTCACAAACCAAGCACCAAGCCTCCCTTTCTTTCTTTTTTTGAAAACTCAGCCACCAACTCTTAGGGTGATAGGTAACAACCAGTATTACCAGTTCAACACGTCCTATGAGGTTGAAAGAGGAGACTCATATTTTGTGATCGCTAACAACACTTTTGAAGGCCTCTCAACATGTCAAGCATTGCAGGACCAAAACAACATTCCCGAAGGAGATTTAATGCCCGGAAATGACCTCAATGTTCCTCTTCGATGCGCTTGTCCCTCGAAGAATCAAACTGAGCAAGGTGTCAAGTACTTGTTGAGTTACCCTGTGGCTTCTAATGACATTGTTTGGCTCATTGGTGAAAGATTTGGTGTCAGCAAGCCTTCGAGTAATCAAACTTCTGAGCCATCTCCACCACCACCACCATCTTCTTCATCTTCTTCAAGTGGAAGCTCAAGCAAAACATGGGTGCATGCAGTTGTAGGAGTTGTTGGAGGTATTGCATTAATATCATTAGTCCTTTGTGCTATCATTTTCAGGAGGCTCTATCTCAAGGTTAATAAAAAGAAAGATGATTCTGTGATTGTGTCTGATAGTTTTGTGGCTGTGGCTATTGAGAAACCACAAGAAAAAAAGTTGGAAGAAGAATCTGAGAATTTGGCAGAGATCATATCTGGCATAGGTCAATCGTTCAAGGTGTACAGATATAAGGAACTACGAAGTGCAACAAATGGTTTTAGTCCCACCTGCTGCATCAAAGGGTCGGTTTATCGCGGTTTCATCAACGGGGATTTGGCTGCAATTAGAAAGATAGATGGTGATGTGTCAAAGGAGATAGAGCTTTTGACCAAAGTGAACCGTTCTAATGTTATACGCCTTTCTGGGGTTTGCTTCAACGAGGGCTATTGGTATCTTTATTATGAGTATGCTGCTAATGGAAACTTGAGTGATTGGATCAACATCAAGGGAAAGTTTATAAGTTGGACACAAAGAATTCAGATTGCATTGGATGTGGCCACAGGACTTGACTATCTTCATAGTTTCACTTCTCCACCCCATGTACACAAGGATCTGAATGGACAGTGA 1107 0.4164 MKNPREMRDRDLPLTNQAPSLPFFLFLKTQPPTLRVIGNNQYYQFNTSYEVERGDSYFVIANNTFEGLSTCQALQDQNNIPEGDLMPGNDLNVPLRCACPSKNQTEQGVKYLLSYPVASNDIVWLIGERFGVSKPSSNQTSEPSPPPPPSSSSSSSGSSSKTWVHAVVGVVGGIALISLVLCAIIFRRLYLKVNKKKDDSVIVSDSFVAVAIEKPQEKKLEEESENLAEIISGIGQSFKVYRYKELRSATNGFSPTCCIKGSVYRGFINGDLAAIRKIDGDVSKEIELLTKVNRSNVIRLSGVCFNEGYWYLYYEYAANGNLSDWINIKGKFISWTQRIQIALDVATGLDYLHSFTSPPHVHKDLNGQ 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01306 368 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 4 40 133 - -
Gma16g01306 368 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 4 133 367 - -
Gma16g01306 368 ProSiteProfiles Protein kinase domain profile. 226 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01306 368 Pfam Protein tyrosine and serine/threonine kinase 281 366 IPR001245 GO:0004672|GO:0006468
Gma16g01306 368 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 40 133 - -
Gma16g01306 368 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 133 367 - -
Gma16g01306 368 Gene3D LysM domain 44 107 IPR036779 -
Gma16g01306 368 Pfam LysM domain 49 94 IPR018392 -
Gma16g01306 368 Gene3D Transferase(Phosphotransferase) domain 1 237 368 - -
Gma16g01306 368 SUPERFAMILY Protein kinase-like (PK-like) 236 366 IPR011009 -
Gma16g01306 368 MobiDBLite consensus disorder prediction 134 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01306 Gma-Chr16 31729038 31732194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01306 31 366 Receptor kinase-like Gene Family AT2G23770 41.555 6.33e-83 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gma16g01306 PK_Tyr_Ser-Thr 6.3e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01306 - - gmx:100806077 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01306 16 31729038 31732194 Gma16g01306 16 31729038 31732194 ECH