Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01295 ATGGGGGCTGGGGAAGAGAGCACAGCTAAATCTTCTAAATCATCTTCATCAGCTCAGCAGGATACACCAACAGCACCTGCATATCCTGATTGGTCAAGCTCCATGCAGGCCTATTATGCTCCTGGAGCCACTCCTCCTCCCTTTTTTGCCACAACCGTTGCTTCCCCAACTCCCCATCCCTATTTATGGGGAGGCCAGCATCCTTTGATGCCGCCATATGGGACTCCAGTCCCATATCCAGCTATATATCCTCCTGGGAGTATCTATGCTCATCCTAGCATGGCAGTGACTCCAAGTGCTGTCCAGCAAAATACAGAGATTGAAGGGAAGGGAGCTGAAGGAAAATATCGGGACTCATCCAAAAAATTGAAAGGACCTTCTGCAAATACAGCTTCCAAAGCAGGAGAAAGTGGAAAGGCAGGCTCAGGTTCAGGCAATGATGGCATATCGCAAAGTGGTGAAAGTGGTTCAGAGGGTTCATCAAATGCTAGCGATGAGAATACTAACCAACAGGAATCAGCTGCAAATAAGAAGGGAAGCTTTGACCTGATGCTTGTTGATGGAGCCAATGCACAGAACAATTCTGCTGGTGCTATTTCTCAATCTTCTGTGCCTGGAAAGCCTGTTGTCCCAATGCCAGCAACTAATCTTAACATTGGAATGGACTTGTGGAATGCATCTTCTGGTGGCGCTGAAGCTGCAAAAATGAGACATAATCAATCTGGTGCCCCGGGAGTTGCCCTTGGTGATCAATGGGTACAAGATGAACGTGAGCTGAAAAGACAGAAGAGGAAACAGTCAAACCGAGAGTCAGCCAGGAGGTCAAGATTACGCAAGCAGGCTGAGTGTGAAGAGTTACAAAAGAGGGTGGAATCGCTGGGAGGTGAGAATCAAACTCTCAGAGAAGAGCTTCAGAGACTTTCTGAAGAATGCGAGAAGCTTACATCCGAAAATAATTCTATCAAGGAAGAGTTGGAGCGGTTGTGTGGTCCAGAAGCAGTTGCTAACCTGGATTAA 1017 0.473 MGAGEESTAKSSKSSSSAQQDTPTAPAYPDWSSSMQAYYAPGATPPPFFATTVASPTPHPYLWGGQHPLMPPYGTPVPYPAIYPPGSIYAHPSMAVTPSAVQQNTEIEGKGAEGKYRDSSKKLKGPSANTASKAGESGKAGSGSGNDGISQSGESGSEGSSNASDENTNQQESAANKKGSFDLMLVDGANAQNNSAGAISQSSVPGKPVVPMPATNLNIGMDLWNASSGGAEAAKMRHNQSGAPGVALGDQWVQDERELKRQKRKQSNRESARRSRLRKQAECEELQKRVESLGGENQTLREELQRLSEECEKLTSENNSIKEELERLCGPEAVANLD 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01295 338 MobiDBLite consensus disorder prediction 229 282 - -
Gma16g01295 338 CDD bZIP_plant_GBF1 261 311 IPR045314 GO:0003700|GO:0006355
Gma16g01295 338 SUPERFAMILY Leucine zipper domain 259 315 IPR046347 GO:0003700|GO:0006355
Gma16g01295 338 MobiDBLite consensus disorder prediction 108 188 - -
Gma16g01295 338 Pfam G-box binding protein MFMR 1 94 IPR012900 -
Gma16g01295 338 PANTHER G-BOX-BINDING FACTOR 1 1 338 - -
Gma16g01295 338 MobiDBLite consensus disorder prediction 46 71 - -
Gma16g01295 338 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 258 321 IPR004827 GO:0003700|GO:0006355
Gma16g01295 338 SMART brlzneu 256 320 IPR004827 GO:0003700|GO:0006355
Gma16g01295 338 Coils Coil 269 324 - -
Gma16g01295 338 Gene3D - 259 313 - -
Gma16g01295 338 MobiDBLite consensus disorder prediction 7 31 - -
Gma16g01295 338 MobiDBLite consensus disorder prediction 1 31 - -
Gma16g01295 338 MobiDBLite consensus disorder prediction 123 177 - -
Gma16g01295 338 Pfam bZIP transcription factor 256 318 IPR004827 GO:0003700|GO:0006355
Gma16g01295 338 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 263 278 IPR004827 GO:0003700|GO:0006355
Gma16g01295 338 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 338 IPR044827 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01295 Gma-Chr16 31559873 31564407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01295 1 338 bZIP Transcription Factor Family AT4G36730 55.162 1.42e-111 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma16g01295 MFMR 1.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01295 K09060 - gmx:778191 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01295 16 31559873 31564407 Gma16g01295 16 31559873 31564407 ECH
Gma02g00534 02 5305261 5311210 Gma16g01295 16 31559873 31564407 ECH
Gma16g01295 16 31559873 31564407 Gma02g00534 02 5305261 5311210 GST