Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01271 ATGAAGGTGGTGGGAAAAGAAAAAGTGATAAAGGTCGGAATGATGGAGCAGGTGAAGAGGGAGATCTCGATGATGAAAATGGTGAAGCACCAAAACATCGTCGAACTCCACGAAGTCATGGCCAGCAAGTCCAAGATCTATATTGCCATGGAACTCGTCCGCGGCGGAGAGCTCTTCAACAAGGTCTCTAAAGGCCGCTTAAAGGAGGACGTGGCAAGACTCTACTTCCAGCAGTTAATCTCCGCCGTCAACTTCTGCCACAGCCGCGACATCTACCACCGCGACCTCAAGCCGGAAAACCTCCTCCTAGACGAACACGGCAACCTCAAAGTCTCCGACTTCGGACTCACCGCTTTCTCCGAACACCTCAAGGAGGACGGGCTGTTACACACCACGTGCGGCACGCCTGCGTACGTGTCGCCTGAAGTGATAGCGAAAAAAGGCTATGATGATGCCAAGGCTGATATATGGTCATGTGGTGTAATCCTCTACGTTCTCCTCGCAGGCTTTTTACCCTTTCAGGATGATAATTTGGTTGCCATGATAATTTGGTGGGGTTAA 561 0.508 MKVVGKEKVIKVGMMEQVKREISMMKMVKHQNIVELHEVMASKSKIYIAMELVRGGELFNKVSKGRLKEDVARLYFQQLISAVNFCHSRDIYHRDLKPENLLLDEHGNLKVSDFGLTAFSEHLKEDGLLHTTCGTPAYVSPEVIAKKGYDDAKADIWSCGVILYVLLAGFLPFQDDNLVAMIIWWG 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01271 186 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 186 - -
Gma16g01271 186 Pfam Protein kinase domain 1 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01271 186 SMART serkin_6 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01271 186 ProSitePatterns Serine/Threonine protein kinases active-site signature. 91 103 IPR008271 GO:0004672|GO:0006468
Gma16g01271 186 SUPERFAMILY Protein kinase-like (PK-like) 1 184 IPR011009 -
Gma16g01271 186 Gene3D Transferase(Phosphotransferase) domain 1 1 183 - -
Gma16g01271 186 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01271 186 PANTHER - 1 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01271 Gma-Chr16 31167402 31167962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01271 14 181 CBL-interacting serine-threonine protein kinases AT4G30960 84.524 4.86e-106 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gma16g01271 Pkinase 2e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01271 - K07198 gmx:100781111 350.132