Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01243 ATGCAACCAAGTTTGGAAACTTCTCTTCAACCTTATTTTTTGTACTTTGAAGTGATACTGAAAGAAGCAACCATAATGGTCAATTCCATGAGCTTTCTCCTGCTTCTTTCTTTACTAGCCTTTGCTCCCTTGTGCCTCTGTAACCTCAACCCTCAGTTTTATGACAATTCATGCCCTCAAGCTCAGCAAATTGCCAAGTCCATTCTTACCTCGTATTTTGTAATTCAACCCGGATATGCGGCTCAAATTCTCAGGCTTCATTTCCATGATTGTTTTGTCATGGGATGTGATGGTTCATTGTTGTTAGATAGCAGTGAAAGCATCGTCAGTGAGAAGGAATCAGATCCCAACCGTGATTCAGCTAGAGGATTTATAGTCATTGATGCAATTAAACTGGCGATAGAGAGAGCATGCCCTTCTACAGTGTCTTGTGCTGACATCTTGACTATAGCTGCAAGAGATTCAGTTGTTCTTACTGGTGGACCAAGCTGGGAAGTACCCTTAGGCAGAAGGGACTCTCGAGATGCAAGCATAAGTGGCTCCAACAACAACATTCCAGCCCCAAATAGCATATTTCCGACCCTCCAAACAAAATTCGAGCAACAGGGGCTTAACCTTACTGATCTAGTTACTCTATCGGGGGCCCATACTCTAGGAGTCGCCAGGTGCACCAACTTCAGGCAAAGACTCTACAACCAAAGTGGAAATGGCCAGCCAGATCCCACTCTTGACCAAAACTATGCTGCTTTTTTGCGTGTTACGTGTCCAAGGACGACTTTGGGTGACCAGAATCCGTTCTTCCTAGACTACGCCACACCACTTAAATTTGACAACAGCTACTTCAAGAACCTGATGGAAAACAAGGGTCTCTTAAATTCTGATCAAATTCTCTTCACAATGAACCAAGAATCAGCTGAGTTAGTGAGGTTGTATGCTGAAAGAAACGACCTTTTCTTTGAACAATTCTCCAAGTCCATGATCAAGATGGGAAACATTTCTCCTTTGACGAATTCAAGTGGAGAGATCAGACAGAACTGCCGGAGGGTTAACGCTTGA 1056 0.4356 MQPSLETSLQPYFLYFEVILKEATIMVNSMSFLLLLSLLAFAPLCLCNLNPQFYDNSCPQAQQIAKSILTSYFVIQPGYAAQILRLHFHDCFVMGCDGSLLLDSSESIVSEKESDPNRDSARGFIVIDAIKLAIERACPSTVSCADILTIAARDSVVLTGGPSWEVPLGRRDSRDASISGSNNNIPAPNSIFPTLQTKFEQQGLNLTDLVTLSGAHTLGVARCTNFRQRLYNQSGNGQPDPTLDQNYAAFLRVTCPRTTLGDQNPFFLDYATPLKFDNSYFKNLMENKGLLNSDQILFTMNQESAELVRLYAERNDLFFEQFSKSMIKMGNISPLTNSSGEIRQNCRRVNA 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01243 351 ProSitePatterns Peroxidases active site signature. 80 91 IPR019794 GO:0004601
Gma16g01243 351 Gene3D Peroxidase, domain 2 186 330 - -
Gma16g01243 351 PRINTS Haem peroxidase superfamily signature 80 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma16g01243 351 PRINTS Haem peroxidase superfamily signature 142 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma16g01243 351 PRINTS Haem peroxidase superfamily signature 160 172 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma16g01243 351 PRINTS Haem peroxidase superfamily signature 208 223 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma16g01243 351 PRINTS Haem peroxidase superfamily signature 269 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma16g01243 351 SUPERFAMILY Heme-dependent peroxidases 49 350 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma16g01243 351 PRINTS Plant peroxidase signature 58 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma16g01243 351 PRINTS Plant peroxidase signature 82 102 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma16g01243 351 PRINTS Plant peroxidase signature 122 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma16g01243 351 PRINTS Plant peroxidase signature 141 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma16g01243 351 PRINTS Plant peroxidase signature 160 175 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma16g01243 351 PRINTS Plant peroxidase signature 207 219 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma16g01243 351 PRINTS Plant peroxidase signature 267 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma16g01243 351 PRINTS Plant peroxidase signature 283 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma16g01243 351 PRINTS Plant peroxidase signature 324 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma16g01243 351 ProSitePatterns Peroxidases proximal heme-ligand signature. 208 218 IPR019793 -
Gma16g01243 351 PANTHER PEROXIDASE 72-RELATED 30 350 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma16g01243 351 Gene3D - 53 350 - -
Gma16g01243 351 ProSiteProfiles Plant heme peroxidase family profile. 48 350 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma16g01243 351 Pfam Peroxidase 71 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma16g01243 351 PANTHER PEROXIDASE 30 350 - -
Gma16g01243 351 CDD secretory_peroxidase 48 349 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01243 Gma-Chr16 30519457 30521502 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01243 26 350 Peroxidase AT5G66390 65.269 2.60e-161 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01243 K00430 - gmx:100811204 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01243 16 30519457 30521502 Gma16g01243 16 30519457 30521502 ECH
Gma02g00479 02 4849961 4852197 Gma16g01243 16 30519457 30521502 ECH
Gma16g01243 16 30519457 30521502 Gma02g00479 02 4849961 4852197 GST