Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01239 ATGTCAACGGAAGCGCCCAAGCGCGACCAATGGCAGTGGGAGAACGCCACCGCCGGCGCCGCCGCCGGATTCGCCACTGTCGCCGTCATGCATCCCCTCGATGTTGTCCGAACTAGGTTCCAAGTTAACGATGGTCGAGTCTCTCATCTTCCTATTTACAAGAACACTGCTCACGCCGTTTTCGCCATCGCTCGCTCTGAGGGATTAAGAGGGTTATATGCAGGCTTTCTTCCTGGGGTTCTTGGGTCAACTATTTCATGGGGTTTATATTTCTTCTTCTATGACAGAGCCAAACAGAGATATGCAAGGAACAGGGAGGAGAAGTTGAGCCCAGGTCTGCACCTTGCCTCAGCTGCTGAAGCAGGAGCTTTGGTTTCCTTCTTCACAAATCCTGTATGGCTAGTAAAGACAAGATTGCAGCTTCAAACTCCTCTTCATCAGACACGACCATACTCTGGGGTTTATGATGCATTTAGGACCATAATGAGGGAAGAAGGATTTAGTGCACTTTACAGAGGGATTGTTCCTGGTCTATTTCTGCAGGTCTCTCATGGTGCTATTCAGTTCACAGCATATGAGGAGCTACGCAAGGTTATTGTTGATTTTAAGAGTAAGGGAAGTACAGTGCATAATCAAAACCCTGATAAATTGCTGAATTCTGTTGATTATGCCGTTCTTGGAGCAACATCAAAACTGGCTGCAGTACTTCTAACCTATCCATTTCAGGTACAACTCTGGACTGAAGTTTCCTTGTCTCTGCAGCAAAGACCCAGTGGTGATGGGGTTCCAAGATATATGGACACGTTGCATGTTGTGAAAGAAACTGCACGATTTGAAGGTATCCGAGGTTTTTACAAAGGAATTACCGCAAACCTCTTGAAGAATGCTCCCGCTTCTTCAATAACATTTATTGTTTATGAAAATGTCCTAAAATTGCTTAAACCAGCAAGAAGGAATGACTGA 963 0.4569 MSTEAPKRDQWQWENATAGAAAGFATVAVMHPLDVVRTRFQVNDGRVSHLPIYKNTAHAVFAIARSEGLRGLYAGFLPGVLGSTISWGLYFFFYDRAKQRYARNREEKLSPGLHLASAAEAGALVSFFTNPVWLVKTRLQLQTPLHQTRPYSGVYDAFRTIMREEGFSALYRGIVPGLFLQVSHGAIQFTAYEELRKVIVDFKSKGSTVHNQNPDKLLNSVDYAVLGATSKLAAVLLTYPFQVQLWTEVSLSLQQRPSGDGVPRYMDTLHVVKETARFEGIRGFYKGITANLLKNAPASSITFIVYENVLKLLKPARRND 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01239 320 SUPERFAMILY Mitochondrial carrier 12 308 IPR023395 -
Gma16g01239 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 100 IPR018108 -
Gma16g01239 320 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 314 IPR044712 GO:0006862|GO:0055085
Gma16g01239 320 Gene3D Mitochondrial carrier domain 1 106 IPR023395 -
Gma16g01239 320 PANTHER BNAA09G07970D PROTEIN 10 314 - -
Gma16g01239 320 Gene3D Mitochondrial carrier domain 107 312 IPR023395 -
Gma16g01239 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 218 312 IPR018108 -
Gma16g01239 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 198 IPR018108 -
Gma16g01239 320 Pfam Mitochondrial carrier protein 221 314 IPR018108 -
Gma16g01239 320 Pfam Mitochondrial carrier protein 109 200 IPR018108 -
Gma16g01239 320 Pfam Mitochondrial carrier protein 11 103 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01239 Gma-Chr16 30476314 30481786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01239 32 313 Chloroplast and Mitochondria Gene Families AT2G47490 36.806 1.80e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01239 K15115 - gmx:100809599 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01239 16 30476314 30481786 Gma16g01239 16 30476314 30481786 ECH
Gma16g01239 16 30476314 30481786 Gma02g00478 02 4830931 4841354 GST