Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01235 ATGGCTTACCTTGTCAAAATCCAGCGCGGCGGCTTCATCCAGCCCTTTGGCTCCATGATCGCCGTCGACGAGCCCTCCTTCCGCATCCTCGGTTACTCCGACAATGACCGCGACATGCTTTGCATTACTCCGCAGTCCGTCCCTTCGCTCGACGACAAGAACGACACCACCTTCGCTCTCAGCACCGATGTCCGAGCCCTCTTCACTCACTCCAGTGCCTTACTCCTCAAAAAGGCCTTTTCAGTTATCAGCTTTCCACATTTTCAAGAGTTGATGGTTCTTGGTTTCCTTTCACTGCTTCTGACTTTTAGGCAGAGTTACATTGTTAGAATACGCATTCCTGTCGGTGTGGCAGACAAATTTTTTCCAATATTGGGAATTTACTATGCCTGCAAATCCTTCAAGATTCCGGCTTACACATGA 423 0.4941 MAYLVKIQRGGFIQPFGSMIAVDEPSFRILGYSDNDRDMLCITPQSVPSLDDKNDTTFALSTDVRALFTHSSALLLKKAFSVISFPHFQELMVLGFLSLLLTFRQSYIVRIRIPVGVADKFFPILGIYYACKSFKIPAYT 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01235 140 PANTHER TWO-COMPONENT HISTIDINE KINASE 2 84 - -
Gma16g01235 140 SUPERFAMILY PYP-like sensor domain (PAS domain) 7 92 IPR035965 -
Gma16g01235 140 PANTHER PHYTOCHROME B-RELATED 2 84 - -
Gma16g01235 140 Pfam PAS fold 2 85 IPR013654 GO:0006355
Gma16g01235 140 Pfam Mlo family 89 123 IPR004326 GO:0006952|GO:0016021
Gma16g01235 140 Gene3D PAS domain 7 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01235 Gma-Chr16 30439585 30441640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01235 2 136 Histidine Kinase Gene Family AT2G18790 46.853 1.48e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01235 K12121 - gmx:100799831 146.362