Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01231 ATGAGACCACCGCACTATAAATATTCATGTCCACATGAGTGGGAAGGTAGCGTTGAGGAAAATAAAAAAGAGAAAGAAAATAATCAATACGACAACTTTGCAATTTTGGTGGTAGACCAAGGTAGGTCAATTGCCATGGACATTGGTGGTGAAGTGGAAGAGACCGTGAGAGAGTTGAGGCAATACTTCAAAACTGGAAAAACCAAGAGTGTGACATGGAGGAAAAACCAGCTCACAGCTCTCTTAGACCTTGTTCATGAGAATGAAGATGCTATATTTAAGGCCCTCCATCAAGATCTTGGGAAGCACCCTGTTGAGGCTTACCGTGATGAGGTTGGAGGGGTAGAAAAATCCGCCAGCAATGCTTTGAGCTGCGTTGAGAAATGGATGGCCCCTAAAAAGAGTGATATCCCTTTTCTTTTCTTCCCAGCTAAAGGAGAAGTGTTGTCAGAACCACTTGGTGTGGTTCTCATATTTTCTTCTTGGAACTTCCCAATCATACTGACATTGGATCCAATAATTGGGGCAATATCTGCTGGAAATGTTGTAGTCATAAAACCTTCAGAGCAATCTCCAGCAAGCTCTTCTTTTCTTGCCACTACCATTCCTCGCTACTTGGACTCTAATGCCATCAAGGTGATTGAGGGAGGACCAGATGTCTGTGAACAACTACTGCTACAAAAATGGGACAAAATATTCTTCACTGGAAGTCCACGTGTGGCAAGCGTAGTCATGTCTGCTGCTGCAAAGAATTTAACTCCCGTTACTCTAGAGTTGGGTGGAAAATGCCCTGCCATTCTTGATTCCCTTCCAAATCCTTTAGAGTTTAAGTTGGCAGTAAAAAGAATTGTAGGAGGAAAGTGGGGACCTTGCAGTGGTCAAGCTTGCATAGCAATAGACTATTTGCTTGTTGAGAAGAAGTTCTCATATGCTCTGATAGAATTACTAAAGAAGATCATTAGAAGATTTTATGGTGAAAATCCAGTGGAGTCAAAGGTAATTTCAAGAATATTAAACAAGCAGCACTTTGAAAGATTATGCAATCTTCTCAAAGACCCTCTTGTTGCGGCTTCCATCGTTCATGGTGGTTCAGTTGACGAAGAAAACTTGTTCATTGAGCCAACAATTTTGTTAGATCCTCCGTTAGATTCTCAGATAATGTCAGAAGAGATATTTGGCCCACTGCTTCCTATAATCACTATGGATAAAATTCAGGAAAGTATTGAATTTATCAATGCAAAGCCAAAACCTCTTGCCATCTATGCCTTCACCAAAGATGAAACTTTCAAGAGAAATATTCTATCAGAAACATCCTCAGGAAGTGTCGTATTTAACGACACAATGGTTCAATTTTTATGTGATACACTACCATTTGGAGGTGTTGGCCAGAGTGGTTTTGGAAGGTACCATGGGAAGTACTCTTTTGACACTTTCAGCCATGAAAAAGCTGTAATGCATAGAAAGCTGTTCCTTGAAATTGAGCCAAGGTACCCTCCTTGGAGTAAGTTCAAGCTCGAGTTTATCAGATTGGCATACAGGCTGAACTACTTTGGACTATTACTGCACATGCTGGGCTTGAAAAGATACAAGTAG 1593 0.4099 MRPPHYKYSCPHEWEGSVEENKKEKENNQYDNFAILVVDQGRSIAMDIGGEVEETVRELRQYFKTGKTKSVTWRKNQLTALLDLVHENEDAIFKALHQDLGKHPVEAYRDEVGGVEKSASNALSCVEKWMAPKKSDIPFLFFPAKGEVLSEPLGVVLIFSSWNFPIILTLDPIIGAISAGNVVVIKPSEQSPASSSFLATTIPRYLDSNAIKVIEGGPDVCEQLLLQKWDKIFFTGSPRVASVVMSAAAKNLTPVTLELGGKCPAILDSLPNPLEFKLAVKRIVGGKWGPCSGQACIAIDYLLVEKKFSYALIELLKKIIRRFYGENPVESKVISRILNKQHFERLCNLLKDPLVAASIVHGGSVDEENLFIEPTILLDPPLDSQIMSEEIFGPLLPIITMDKIQESIEFINAKPKPLAIYAFTKDETFKRNILSETSSGSVVFNDTMVQFLCDTLPFGGVGQSGFGRYHGKYSFDTFSHEKAVMHRKLFLEIEPRYPPWSKFKLEFIRLAYRLNYFGLLLHMLGLKRYK 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01231 530 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 60 482 IPR016162 GO:0016491
Gma16g01231 530 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 261 464 IPR016163 GO:0016620
Gma16g01231 530 PIRSF ALDH 20 525 IPR012394 GO:0006081
Gma16g01231 530 SUPERFAMILY ALDH-like 51 499 IPR016161 GO:0016491
Gma16g01231 530 Pfam Aldehyde dehydrogenase family 51 484 IPR015590 GO:0016491
Gma16g01231 530 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER F1 53 528 - -
Gma16g01231 530 PANTHER ALDEHYDE DEHYDROGENASE 53 528 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01231 Gma-Chr16 30238349 30242421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01231 52 528 Aldehyde Dehydrogenase Gene Family AT4G36250 63.941 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01231 K00128 - gmx:100808513 1054.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01231 16 30238349 30242421 Gma16g01231 16 30238349 30242421 ECH
Gma16g01231 16 30238349 30242421 Gma02g00470 02 4700579 4705528 GST