Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01220 ATGCTTTGCGAGCTAGTCCTCATAAGCATTACTGTTATGAATCAGCCCAAGGTGGAGCAATTCAGCACAGagcaatccaacacagaagaagaaatagtagcagacaagggccctaatcagcccaataacttcactcatgGAAAAGAATATCTTCAAGATAAGCAGTTGGAGTCAGACATCACATTTCATGTTGGAAAGCAAGAAGCTGAGCTTGCTTTGACGGTCAATAATGCAGCTTTCAATAGGGATCTGTATCAGCTAAAAGGTTTAATTCGCGCTAGAGCTGATCCCAACAAGACAGATTATGATGGACGGTCACCTTTGCATCTTGAAGCATCTAGAGGATATGAAGATATCACACTTTTCCTTATGTAA 375 0.3333 MLCELVLISITVMNQPKVEQFSTEQSNTEEEIVADKGPNQPNNFTHGKEYLQDKQLESDITFHVGKQEAELALTVNNAAFNRDLYQLKGLIRARADPNKTDYDGRSPLHLEASRGYEDITLFLM 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01220 124 ProSiteProfiles Ankyrin repeat region circular profile. 103 124 - -
Gma16g01220 124 MobiDBLite consensus disorder prediction 23 46 - -
Gma16g01220 124 Gene3D - 64 124 IPR036770 -
Gma16g01220 124 SUPERFAMILY Ankyrin repeat 75 123 IPR036770 -
Gma16g01220 124 PANTHER POTASSIUM CHANNEL AKT1 31 124 IPR045319 GO:0005249|GO:0006813
Gma16g01220 124 ProSiteProfiles Ankyrin repeat profile. 103 124 IPR002110 GO:0005515
Gma16g01220 124 PANTHER POTASSIUM CHANNEL SKOR-LIKE 31 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01220 Gma-Chr16 29960701 29962184 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01220 31 124 Ion Channels AT5G37500 53.846 5.35e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01220 K21867 - gsj:114389934 176.022