Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01219 ATGCCAACCTTTCTCATCCTCGTGCTATTGTGCGCACGCTTCTTATCATGCGCCCAGTGCGGCTCCGTGACGGAGATCCAAGCCTTAACGTCGTTGAAGCTCAACCTCCATGACCCTCTTGGCGCACTCAACGGTTGGGATCCGTCAACTCCGTTAGCTCCGTGCGACTGGCGTGGAGTTTCATGCAAAAACGATCGAGTCACCGAGTTACGCTTGCCTCGCCTTCAACTCAGTGGCCAACTCGGTGACCGAATTTCAGACTTACGCATGCTCCGAAGGCTAAGCCTCCGTTCCAACTCCTTCAACGGCACCATTCCTCACTCGCTCTCCAAATGCACGCTCCTACGCGCCTTGTTCTTACAGTACAACTCGCTCTCTGGCCAACTTCCGCCGGAGATCGGAAACCTCGCCGGCCTCCAGATTCTCAATGTCGCCGGTAACAATCTCTCCGGCGAAATCTCCGGCGAACTTCCTCTCCGTCTTAAATACATCGACATTTCCGCGAATTCTTTCTCCGGCGAGATTCCGAGCACTGTGGCGGCTCTTTCCGAACTTCAGCTTATCAACTTTTCCTATAACAAATTCTCCGGCCAAATTCCGGCGCGTATAGGAGAGCTTCAGAATCTGCAATACCTTTGGCTCGATCATAACGTTCTTGGAGGAACCTTACCTTCGTCTCTCGCGAATTGTTCCTCGCTCGTGCATTTAAGCGTTGAAGGGAACGCGCTCGCCGGCGTGTTGCCGGCGGCAATTGCTGCTCTCCCTAACCTTCAGGTGCTGTCCCTCGCGCAGAACAATTTCACCGGGGCAATTCCCGCTTCCGTTTTCTGTAACGTCTCGCTCAAAACGCCGTCGCTCCGCATCGTTCAGTTAGAGTTTAATGGTTTCACCGACTTCGCGTGGCCTCAAGCCGCCACAACGTGTTTCAGCGTTCTCGAAGTTTTCAACATTCAGCGCAATCGCGTGGGCGGCAAGTTTCCGCTGTGGTTAACCAATGTCACCACGCTGTCCGTCCTCGATGTTTCCGGCAATGCGCTCTCCGGCGAAATTCCGCCGGAAATTGGACGCCTCGAGAAACTGGAGGAGTTGAAGATAGCCAACAATTCATTTTCCGGGGAGATTCCGCCGGAGATCGTGAAATGCAGGTCCCTGCGTGCTGTTGTTTTTGAAGGTAACAGGTTTTCCGGTGAGGTTCCTTCGTTTTTCGGTAGCCTTACACGGCTGAAGGTTCTGTCTCTTGGTGTGAACAATTTTTCTGGTTCTGTTCCAGTGAGTATTGGTGAGCTTGCGTCTCTTGAAACGTTGAGTTTAAGGGGTAATAGGTTGAATGGTACAATGCCAGAGGAGGTGATGTGGTTGAAGAATTTGACAATATTAGACCTCAGTGGAAACAAATTTTCGGGTCATGTTTCTGGTAAAATTGGGAACCTGAGTAAATTAATGGTTCTGAATCTGAGTGGCAATGGCTTCCACGGAGAAATTCCTTCTACTTTGGGGAATCTTTTCCGTCTCGCTACACTTGACTTGAGCAAACAAAATCTCTCTGGTGAATTGCCCTTTGAAATTTCAGGACTTCCCAGTTTGCAAGTCATTGCTCTTCAAGAGAACAAGTTGTCTGGGGTGATCCCTGAAGGGTTTAGCAGCTTGACCAGTTTGAAACACGTGAACCTAAGCTCTAACGATTTTTCTGGGCATGTCCCCAAGAACTATGGCTTTCTTCGATCATTGGTTGTTCTTTCACTATCCCATAACCGCATCACAGGAATGATTCCCCCGGAAATTGGAAACTGCTCTGACATTGAAATTCTCGAGCTTGGATCAAATTACTTGGAGGGTCCAATTCCCAAAGATCTCTCTAGCCTTGCCCATTTGAAAATGCTTGATTTGGGTAAGAACAATTTAACTGGAGCTTTGCCTGAGGATATCTCCAAATGCTCATGGTTAACTGTTTTGTTAGCAGATCACAACCAACTCTCTGGTGCTATACCAGAGTCATTGGCAGAGTTATCATACCTAACAATACTGGATCTCTCTGCCAACAATTTGAGTGGGGAAATCCCAAGTAATCTGAACACAATCCCTGGTTTGGTTAACTTCAATGTCTCGGGTAACAACTTAGAAGGTGAGATTCCAGCGATGTTGGGTTCTAAATTCAACAACCCTTCTGTATTTGCAAACAACCAGAACCTATGTGGGAAGCCATTGGATAAAAAATGCGAGGAAACAGACAGTGGGGAGAGAAATAGGTTGATAGTGTTGATCATTATCATCGCAGTTGGAGGTTGCTTATTGGCACTATGTTGCTGCTTCTACATTTTCAGCTTACTAAGATGGCGCAGAAGGATCAAAGCGGCAGTGTCAGGGGAGAAGAAAAAGAGTCCAAGAACGAGTTCCGGAACAAGCCAGAGCCGTAGCAGCACCGACACAAACGGTCCAAAACTCGTCATGTTCAACACCAAGATCACTCTCGCGGAAACAATCGAAGCAACGAGGCAATTTGACGAAGAAAACGTGCTGAGCAGAACAAGACACGGGTTGGTATTCAAAGCCTGCTACAACGACGGAATGGTCTTTTCCATTCGCAAGCTCCAAGATGGGTCATTAGACGAAAACATGTTCAGAAAAGAAGCAGAGTCCTTGGGCAAAATCAGGCACCGAAATTTAACAGTTCTCAGAGGCTACTACGCTGGTTCACCAGATGTTAGACTCTTGGTATACGATTACATGCCCAATGGAAACCTCGCAACGTTGCTCCAAGAAGCTTCTCATTTAGATGGGCATGTTTTGAATTGGCCAATGCGACACCTCATTGCACTAGGAATTGCTCGCGGCATAGCGTTTTTGCACCAATCTTCACTTATCCACGGTGACATCAAACCCCAAAACGTGCTTTTTGATGCAGACTTCGAAGCCCATTTATCAGATTTCGGGCTTGACAAGTTAACAGTTACCAACAACAACAACAACAATGCAGTTGAAGCCTCTACTTCAAGCACGGCTTCCGTTGGCACGTTGGGTTACGTGTCACCGGAAGCTACTTTAACCGGGGAAGCCACGAAGGAGTGTGACGTGTACAGCTTCGGCATCGTGTTGCTGGAGCTTCTAACCGGGAAGAGGCCCGTGATGTTCACACAGGACGAGGATATTGTTAAGTGGGTGAAGAAGCAGCTTCAGAAGGGGCAAATTACGGAGTTATTAGAGCCTGGTTTGTTTGAACTTGACCCAGAGTCTTCTGAATGGGAAGAGTTTCTGTTGGGTGTGAAAGTGGGCTTGCTTTGCACAGCACCGGATCCTCTTGATCGTCCAACCATGTCTGATATTGTGTTCATGCTCGAAGGTTGTCGTGTTGGACCCGATATTGCTTCCTCCGCTGATCCCACCACCCAACCTTCTCCTGTCTAA 3402 0.4824 MPTFLILVLLCARFLSCAQCGSVTEIQALTSLKLNLHDPLGALNGWDPSTPLAPCDWRGVSCKNDRVTELRLPRLQLSGQLGDRISDLRMLRRLSLRSNSFNGTIPHSLSKCTLLRALFLQYNSLSGQLPPEIGNLAGLQILNVAGNNLSGEISGELPLRLKYIDISANSFSGEIPSTVAALSELQLINFSYNKFSGQIPARIGELQNLQYLWLDHNVLGGTLPSSLANCSSLVHLSVEGNALAGVLPAAIAALPNLQVLSLAQNNFTGAIPASVFCNVSLKTPSLRIVQLEFNGFTDFAWPQAATTCFSVLEVFNIQRNRVGGKFPLWLTNVTTLSVLDVSGNALSGEIPPEIGRLEKLEELKIANNSFSGEIPPEIVKCRSLRAVVFEGNRFSGEVPSFFGSLTRLKVLSLGVNNFSGSVPVSIGELASLETLSLRGNRLNGTMPEEVMWLKNLTILDLSGNKFSGHVSGKIGNLSKLMVLNLSGNGFHGEIPSTLGNLFRLATLDLSKQNLSGELPFEISGLPSLQVIALQENKLSGVIPEGFSSLTSLKHVNLSSNDFSGHVPKNYGFLRSLVVLSLSHNRITGMIPPEIGNCSDIEILELGSNYLEGPIPKDLSSLAHLKMLDLGKNNLTGALPEDISKCSWLTVLLADHNQLSGAIPESLAELSYLTILDLSANNLSGEIPSNLNTIPGLVNFNVSGNNLEGEIPAMLGSKFNNPSVFANNQNLCGKPLDKKCEETDSGERNRLIVLIIIIAVGGCLLALCCCFYIFSLLRWRRRIKAAVSGEKKKSPRTSSGTSQSRSSTDTNGPKLVMFNTKITLAETIEATRQFDEENVLSRTRHGLVFKACYNDGMVFSIRKLQDGSLDENMFRKEAESLGKIRHRNLTVLRGYYAGSPDVRLLVYDYMPNGNLATLLQEASHLDGHVLNWPMRHLIALGIARGIAFLHQSSLIHGDIKPQNVLFDADFEAHLSDFGLDKLTVTNNNNNNAVEASTSSTASVGTLGYVSPEATLTGEATKECDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLFELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMSDIVFMLEGCRVGPDIASSADPTTQPSPV 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01219 1133 Gene3D Phosphorylase Kinase; domain 1 795 908 - -
Gma16g01219 1133 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Gma16g01219 1133 SMART LRR_typ_2 573 597 IPR003591 -
Gma16g01219 1133 SMART LRR_typ_2 621 645 IPR003591 -
Gma16g01219 1133 SMART LRR_typ_2 477 501 IPR003591 -
Gma16g01219 1133 SMART LRR_typ_2 357 381 IPR003591 -
Gma16g01219 1133 SMART LRR_typ_2 88 112 IPR003591 -
Gma16g01219 1133 SMART LRR_typ_2 206 230 IPR003591 -
Gma16g01219 1133 SMART LRR_typ_2 525 548 IPR003591 -
Gma16g01219 1133 SMART LRR_typ_2 429 453 IPR003591 -
Gma16g01219 1133 SMART LRR_typ_2 254 278 IPR003591 -
Gma16g01219 1133 SMART LRR_typ_2 669 693 IPR003591 -
Gma16g01219 1133 SMART LRR_sd22_2 429 444 - -
Gma16g01219 1133 SMART LRR_sd22_2 206 229 - -
Gma16g01219 1133 SMART LRR_sd22_2 621 644 - -
Gma16g01219 1133 SMART LRR_sd22_2 453 479 - -
Gma16g01219 1133 SMART LRR_sd22_2 254 281 - -
Gma16g01219 1133 SMART LRR_sd22_2 573 599 - -
Gma16g01219 1133 SMART LRR_sd22_2 669 692 - -
Gma16g01219 1133 Pfam Leucine rich repeat 208 267 IPR001611 GO:0005515
Gma16g01219 1133 Pfam Leucine rich repeat 383 442 IPR001611 GO:0005515
Gma16g01219 1133 Pfam Leucine rich repeat 574 634 IPR001611 GO:0005515
Gma16g01219 1133 Pfam Leucine rich repeat 503 562 IPR001611 GO:0005515
Gma16g01219 1133 Gene3D Ribonuclease Inhibitor 279 471 IPR032675 -
Gma16g01219 1133 MobiDBLite consensus disorder prediction 791 813 - -
Gma16g01219 1133 ProSiteProfiles Protein kinase domain profile. 833 1120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01219 1133 SUPERFAMILY Protein kinase-like (PK-like) 814 1118 IPR011009 -
Gma16g01219 1133 Gene3D Ribonuclease Inhibitor 158 278 IPR032675 -
Gma16g01219 1133 Gene3D Ribonuclease Inhibitor 472 747 IPR032675 -
Gma16g01219 1133 Gene3D Ribonuclease Inhibitor 22 157 IPR032675 -
Gma16g01219 1133 Gene3D Transferase(Phosphotransferase) domain 1 909 1122 - -
Gma16g01219 1133 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR KINASE XIAO-RELATED 4 1129 - -
Gma16g01219 1133 SUPERFAMILY L domain-like 23 346 - -
Gma16g01219 1133 MobiDBLite consensus disorder prediction 787 813 - -
Gma16g01219 1133 SMART serkin_6 833 1110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01219 1133 SUPERFAMILY L domain-like 330 568 - -
Gma16g01219 1133 SUPERFAMILY L domain-like 494 733 - -
Gma16g01219 1133 ProSitePatterns Serine/Threonine protein kinases active-site signature. 953 965 IPR008271 GO:0004672|GO:0006468
Gma16g01219 1133 Pfam Protein kinase domain 844 1107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01219 1133 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 1129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01219 Gma-Chr16 29950492 29953893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01219 4 1133 Receptor kinase-like Gene Family AT4G36180 65.732 0.0 1443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Gma16g01219 Pkinase 6.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01219 - - gmx:100804785 2169.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01219 16 29950492 29953893 Gma02g00458 02 4610781 4614173 GST