Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01214 ATGTCGTCGTCGTCGTCGAAGGGTGGTGGCGGTATtgaggttagggcttcgcacatattgataaagcacgaaggttctagaaggaaggcctcgtggaaggatcctgaaggtcgcatcatcaagagcacaaccagagaaaacgcggtttctcagctcaaggccctccgcgacgacatcgtttcgggcaaggcctccttcgaggacatcgcctctcgcttctccgattgcagctccgccaagcgcgggggtgatctcgGTCCTTTTGGTCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACTTTTGCTCTTAAAGTTGGTGAAATTAGTGACATTGTGGATACTGACAGTGGAGTCCACATTATTAAGAGAACAAAATGA 381 0.1864 MSSSSSKGGGGIEVRASHILIKHEGSRRKASWKDPEGRIIKSTTRENAVSQLKALRDDIVSGKASFEDIASRFSDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKRTK 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01214 126 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 11 126 IPR000297 GO:0003755
Gma16g01214 126 Gene3D - 12 126 IPR046357 GO:0003755
Gma16g01214 126 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 3 125 - -
Gma16g01214 126 SUPERFAMILY FKBP-like 13 125 - -
Gma16g01214 126 Pfam PPIC-type PPIASE domain 18 125 IPR000297 GO:0003755
Gma16g01214 126 MobiDBLite consensus disorder prediction 17 39 - -
Gma16g01214 126 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01214 Gma-Chr16 29848482 29850580 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01214 44 123 Sulfurtransferasese or Rhodanese AT5G19370 32.927 4.36e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01214 K09578 - gmx:100500451 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01214 16 29848482 29850580 Gma16g01214 16 29848482 29850580 ECH