Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01211 ATGGCCATCAAAAAATCCAATAAGCTACCCCAAGCAGATGTGATCAAGCAAATTGTGAGAAGGTGTTCAAGTTTTGGGAAGAAGCAGCAGGGCTACAATGAAGAGGGTGGTCTTCCAGAAGATGTGCCAAAAGGGCACTTTGCAGTGTATGTTGGTGAAAACAGGACAAGATATATTGTCCCAATTTCATGGTTAGCTCATCCACAATTTCAAAGCTTGCTCCAAAGAGCTGAGGAGGAGTTTGGCTTCAATCATGACATGGGCCTTACCATCCCATGTGATGAAGTTGTTTTTGAGTTTCTTACCTCAATGATTAGATGA 321 0.4237 MAIKKSNKLPQADVIKQIVRRCSSFGKKQQGYNEEGGLPEDVPKGHFAVYVGENRTRYIVPISWLAHPQFQSLLQRAEEEFGFNHDMGLTIPCDEVVFEFLTSMIR 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01211 106 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 7 106 - -
Gma16g01211 106 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 106 IPR003676 GO:0009733
Gma16g01211 106 Pfam Auxin responsive protein 34 105 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01211 Gma-Chr16 29808105 29808544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01211 39 105 Calmodulin-binding Proteins AT3G43120 50.746 1.34e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01211 K14488 - gmx:100500218 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00449 02 4524419 4524995 Gma16g01211 16 29808105 29808544 ECH
Gma04g00238 04 2056145 2056770 Gma16g01211 16 29808105 29808544 ECH
Gma16g01211 16 29808105 29808544 Gma11g00693 11 5790793 5791361 ECH
Gma16g01211 16 29808105 29808544 Gma01g01708 01 52780983 52781965 ECH
Gma16g01211 16 29808105 29808544 Gma02g00449 02 4524419 4524995 ECH
Gma16g01211 16 29808105 29808544 Gma16g01211 16 29808105 29808544 ECH