Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01202 ATGGGAACAAGTCCTCTATATGTTTTTATTGATGTCTTCAGCAAGGTTCCAATGGGATCAAATGATGATATCTTGGGGGCATTATCATTAGTAATGTATACAATAGCACTTATTCCATTAGCAAAATATGTTTTTATAGTCCTCAAAGCAAATGACAGTGGAGAAGGAGGAATGTTTGCACTATACTCGCTGATTTGCAGGTATGCAAATGTGGGTCTGCTTCCAAATCTTCAACAAGCTGATGAACATATCTCTAGTTTTAAGGTCAAACTGCCTACTCCAGAAATGGAAAGGGCTTTAAAAATAAAGGACACTTTGGAAAGGACATCGTTTTTGAGGAACCTATTATTGGAGTTGGTTATTCTGGGAGCTTCCATGGTTATTGGAGATGGTATTCTAACCCCAAAATATCAGGTTGACATTGACTTTGAAAAGGAACCAATAGGAATAGGGAAAGATGGAAATAATGTTTACGTAAGAGATATCTGGCCATCCACTCAAGAAATTGTAGAGGCAAATAATACCGTGTACTCATGGGACCCCAAGTCAACATATATTCATGAACCTTCATACTTCAATGGCATGATCATGGATCCTCCTGGAGCTCATGACCCTGAGGTAGAAGTGATAGCATTGACTCCGCAGACCCTTTTGGCAACAAACAGGTTCTTTTTAGAGATTTGCCAGAAAGGGTTCCAAAGAGGCCAGAATTTGCAGCTTCACAGAAGAAGGCACAATTTGTCATGGAAGCTAAAGAAAAAGAGCAGCAAAGACATGAGAAAGAAAGTGTATGTGTGCCCAGAGGCAACATGCGATCACCATGACCCTTCAAGAGCACTTGGGGACCTCACTGGAATCAAGAAACACTTCTTCAAGAAACACGAAGAGAAGAAATGGAAGTGTGACAAGTGCTCCAAATGCTATGTGGTTCAATAA 936 0.4017 MGTSPLYVFIDVFSKVPMGSNDDILGALSLVMYTIALIPLAKYVFIVLKANDSGEGGMFALYSLICRYANVGLLPNLQQADEHISSFKVKLPTPEMERALKIKDTLERTSFLRNLLLELVILGASMVIGDGILTPKYQVDIDFEKEPIGIGKDGNNVYVRDIWPSTQEIVEANNTVYSWDPKSTYIHEPSYFNGMIMDPPGAHDPEVEVIALTPQTLLATNRFFLEICQKGFQRGQNLQLHRRRHNLSWKLKKKSSKDMRKKVYVCPEATCDHHDPSRALGDLTGIKKHFFKKHEEKKWKCDKCSKCYVVQ 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01202 311 Gene3D - 162 197 - -
Gma16g01202 311 PANTHER POTASSIUM TRANSPORTER 12-RELATED 1 139 - -
Gma16g01202 311 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 139 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gma16g01202 311 Gene3D Aconitase, domain 3 133 161 IPR015931 -
Gma16g01202 311 Pfam K+ potassium transporter 1 137 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01202 Gma-Chr16 29650274 29652306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01202 200 311 IDZ Gene Family AT3G50700 77.679 1.83e-59 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma16g01202 K_trans 1.8e-26 CL0062
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01202 K03549 - gmx:100814419 238.81