Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01196 ATGGAGGTCGAGGTGCCAATCTCGCTTGATTTGAATAATCAACTTCAGCCAGAGACCGTAGTTTCAGTTCAAAATGGGGATCCTGGTGTTTCCTCTTCTGTTGCAAATGCTGTTAACCCGCAGCAGCCAGCTACAAAAAAACCGACCAGGCAGTGGGCTGCATGGACTCGACAAGAGGAGGAAAGTTTCTTCACCGCGTTACGACAAGTTGGGAAGAATTTTGAGAAAATCACTTCCCGTGTACAAAGTAAAAACAAGGATCAGGTCAGGCATTATTACTACCGACTTGTGAGACGGATGAACAAACTTCTTGGTCCAGGATTATGTTTGGATGCCAAAAACTCTAAAGATACTAATGCTGCAATGCTTCGCTGGTGGTCTTTATTAGAAAAGTATAGCTGCAAAGCCTCAAAGCTTCACCTGAAGCCCCGGAGATTTAAAATTTTTTTAGAAGCCTTGGAGCACCAATTATTGAAGGATCGGAAGAAGAATGTGAGGAAGCGACCCTTACAGGGGGGGAATTGTCTTCCTGCTGCACCTACCGCAGTCTCAAATCAAAGTAGAGCATCAGGAAATGATGCCCGTGCAGTTAAACTGGTACTTGTTGACAATCAAAATATTTTAAAATTGGGACCTTCTAAACCATCAACGAAGCGCACTGTAAACATGGGTGTTAACCATAGTAACACCAAGGGAGATTCAAATACCATGAAACCAACAAGGCAACGAAAGAAATCTGGTACGATTTCAACGGCTGCTTATAAAAAATGGGAGAAGGCTGCAATTGCTGGTGTTTCTTTAGTTGCAGATGCTGCTGAGCATTTGGAGCGAGCTGCAACTGTTAAAGAAATTGAACAAGACCAGGAGAATCCAGGAGAAAGATGTTCTGATCCCGCTGATTATGTCCTGCCCTCTTTAGCCAAATGTCCACAAAAGCAATTTGTTGATAACAATGTGAACAATATTATGAAACTTAAGCTCCAGTTATTTCCAATTGATGAACCTACTCGAAGAGCATTGGAAATGGATAAGCATAATCCACACCTGGAGCTTACACTTAGTACTCGAAAGAAGATATCATCAATTTTAGAACATCTAAACCGTAAATGGGGTAATTCAAGCATAGCAGCTGGAGAAGTAATGCTTTTTCCTTATGGTATTCAAAGGGAAAATTTAGTTAATTATCCGAGATGGACCCAGGAATCTACTCTTAGTGCAGCTGATATATATGCAATGATTGGAAGTCCACCCATCTTCCGTTTAAGGTATGGTTGGTTCTCCAATACTGAGCTTGGGTTATTAAATATGCAAGTGCCTGAAGCATCTGGCTCCATGCTCAGACAATACAAAAGTAGTGTGGACAATGCTAAGGATCCGATTGTGAATTCAGTTTCATTTCCTACACCATTGACTAATACTCTTTCCATGGAGCTCTCTGAAGATTGCAGAACATCCATGAACAGAAACCATACTCTTATGACTGCTTCAACTGATTTGTCTAATGCTAGAGGAAACAATGTTTACCTGAATACAAGCACTGTGGAATCTCGTGATCCTACAGCCAATACACCATGGCATGGAAAAGATGTTAGGGATGGAGCTGTGACTACACAGTTGGAAGACATGGATGAGTTGAAATTAAGCAGTGGAGCAGGACTGTCAGCTGGAGAGTGGGCTGACAGCCTTACCAACATTAGTGTGGGGGACCTACTTTCAGGAGTGTCCCAGGATCTTGATAACTGCATCAATCCTCCTATTGCAGAGAGTTGTTATGATGTTCAGCAAATTCCTTTTAGTAGTGATTCTTTTGATGCTGCTATTGCTGCTCACATATCTAGACACCAAGACAGGATGGGACGATCCTCTCTGGCATCCCATATGTCTTCCATCTGGGATGCTGAAGAAACTTGTGATGCCTTTTTATTTAAAAAGGATCCTATTCTTCAAGAATATCGTCCTTGTTTATCTCCAGTTGCTTCTTTAGAGTCTGAGAAAAAGGTTACTAAAAGAAGCTTTGACAAATTGGATGAGCTGTCACCTGAAAGAGAGAGGCTTGTGGATGATTGTGCTCAAACAGACCCTATGCCTATGGACAGTTCCGAGTCTGATGCAGATGTCCAGGAGCATTTAGGAAAGGATTTTAGTGCGCTGGCAGATATGTATTGGCCTGATTCCTTGGGACCTTTGGATTTGGAAATACCATCATCAACTAAATACCATAGCGAAGATCTAATTTTTAGTGATAGTCTTAGTGGACTGAATCGCTTGATAGCCAGCAGCCTGGATGCATTCCAGAATTGCTCCTTTTTTGGGTTTGACAAGAAGGAAGCACCATCAACAGTTGAGGCTCGAGAATCTGCCACTCTTTCAGATTTTAAAATTGGAAGTGGCATCTGA 2397 0.4201 MEVEVPISLDLNNQLQPETVVSVQNGDPGVSSSVANAVNPQQPATKKPTRQWAAWTRQEEESFFTALRQVGKNFEKITSRVQSKNKDQVRHYYYRLVRRMNKLLGPGLCLDAKNSKDTNAAMLRWWSLLEKYSCKASKLHLKPRRFKIFLEALEHQLLKDRKKNVRKRPLQGGNCLPAAPTAVSNQSRASGNDARAVKLVLVDNQNILKLGPSKPSTKRTVNMGVNHSNTKGDSNTMKPTRQRKKSGTISTAAYKKWEKAAIAGVSLVADAAEHLERAATVKEIEQDQENPGERCSDPADYVLPSLAKCPQKQFVDNNVNNIMKLKLQLFPIDEPTRRALEMDKHNPHLELTLSTRKKISSILEHLNRKWGNSSIAAGEVMLFPYGIQRENLVNYPRWTQESTLSAADIYAMIGSPPIFRLRYGWFSNTELGLLNMQVPEASGSMLRQYKSSVDNAKDPIVNSVSFPTPLTNTLSMELSEDCRTSMNRNHTLMTASTDLSNARGNNVYLNTSTVESRDPTANTPWHGKDVRDGAVTTQLEDMDELKLSSGAGLSAGEWADSLTNISVGDLLSGVSQDLDNCINPPIAESCYDVQQIPFSSDSFDAAIAAHISRHQDRMGRSSLASHMSSIWDAEETCDAFLFKKDPILQEYRPCLSPVASLESEKKVTKRSFDKLDELSPERERLVDDCAQTDPMPMDSSESDADVQEHLGKDFSALADMYWPDSLGPLDLEIPSSTKYHSEDLIFSDSLSGLNRLIASSLDAFQNCSFFGFDKKEAPSTVEARESATLSDFKIGSGI 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01196 798 SUPERFAMILY Homeodomain-like 47 101 IPR009057 -
Gma16g01196 798 Gene3D - 9 104 - -
Gma16g01196 798 MobiDBLite consensus disorder prediction 164 190 - -
Gma16g01196 798 PANTHER CRAMPED PROTEIN 18 774 - -
Gma16g01196 798 PANTHER PROTEIN CRAMPED-LIKE 18 774 - -
Gma16g01196 798 SMART sant 51 99 IPR001005 -
Gma16g01196 798 ProSiteProfiles Myb-like domain profile. 47 97 IPR001005 -
Gma16g01196 798 CDD SANT 54 97 IPR001005 -
Gma16g01196 798 ProSiteProfiles SANT domain profile. 55 101 IPR017884 -
Gma16g01196 798 MobiDBLite consensus disorder prediction 210 248 - -
Gma16g01196 798 Pfam Myb-like DNA-binding domain 54 96 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01196 Gma-Chr16 29588278 29594851 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma16g01196 Myb_DNA-binding 5.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01196 - - gmx:100798411 1594.71