Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01195 ATGTCAACACCTCAAGTCATTACCTGCAAAGCTGCAGTGGCATGGGGAGCTGGGGAAGCATTGGTGATAGAGGAAGTGGAAGTGAGTCCTCCTCAACCAATGGAGATTAGGATTAAGGTTGTCTCCACTTCTCTCTGTCGCAGTGATCTCTCCGCTTGGGAATCTCATgccatatttcctcgaatatttggccatgaagcatcaggCATTGTTGAGAGTGTGGGACAAGGAGTGACTGAATTCAAAGAGGGGGACCATGTGCTAACAGTATTCATTGGAGAATGCATATCATGCAGGCAGTGCACATCTGGAAAAAGCAACACTTGTCTAAAAGGGGAACCTGTTTATGATTATTGTGCTGTTTCAAGTTTCAGTGAATACACAGTAGTCCATTCTGGATGTGCAGTGAAACTCAGTCCCCTTGCACCTCTTGAGAAAATATGTCTTCTGagctgtggggttgctgcagGTCTGGGCGCAGCATGGAATGTTGCTGACGTGTCAAAAGGATCAACTGTGGTGATTTTTGGTCTTGGAACTGTTGGCCTATCTGTTGCTCAAGCTTCCAAACTAAGAGGTGCATCTCGAATAATTGGTGTGGACAATAATCCACAGAAGTGTGAAAATGCTTTTGGGGTTACTGAAGTTGTTATTAAGTGCATTACTGATGGAAGGGCAGATTTCTCGTTCGAATGTGGATGGGGTTTGACTGTAACACTTGGTGTGCCAAAGGTGAAGCTTGAGATGTCAGCTCGTTATGGACTACTCCTAATGGGAAGAACATTGAAAGGATCTCTATTTTGGGGATGGAAACCAAAATCTGATCTGCCTTCATTAGTAAAGAAGTACCTCAACAAGGAAATCCAGATTGATGACTACATAACACACAATTTGCCATTTGATGACATTAACAAAGCTTTCAATCTCATGAAGGAAGGAAAGTGTCAGAGATGTGTTATCCACATGCCAAGATAA 975 0.4062 MSTPQVITCKAAVAWGAGEALVIEEVEVSPPQPMEIRIKVVSTSLCRSDLSAWESHAIFPRIFGHEASGIVESVGQGVTEFKEGDHVLTVFIGECISCRQCTSGKSNTCLKGEPVYDYCAVSSFSEYTVVHSGCAVKLSPLAPLEKICLLSCGVAAGLGAAWNVADVSKGSTVVIFGLGTVGLSVAQASKLRGASRIIGVDNNPQKCENAFGVTEVVIKCITDGRADFSFECGWGLTVTLGVPKVKLEMSARYGLLLMGRTLKGSLFWGWKPKSDLPSLVKKYLNKEIQIDDYITHNLPFDDINKAFNLMKEGKCQRCVIHMPR 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01195 324 Pfam Alcohol dehydrogenase GroES-like domain 34 137 IPR013154 -
Gma16g01195 324 PANTHER ALCOHOL DEHYDROGENASE-LIKE 6 4 322 - -
Gma16g01195 324 Gene3D - 157 265 - -
Gma16g01195 324 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 64 78 IPR002328 GO:0008270|GO:0016491
Gma16g01195 324 SUPERFAMILY GroES-like 273 321 IPR011032 -
Gma16g01195 324 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 143 286 IPR036291 -
Gma16g01195 324 PANTHER ALCOHOL DEHYDROGENASE 4 322 - -
Gma16g01195 324 Gene3D - 14 318 - -
Gma16g01195 324 SUPERFAMILY GroES-like 3 162 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01195 Gma-Chr16 29577883 29582392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01195 6 320 Monolignol Biosynthesis Gene Families AT2G21730 25.419 3.69e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01195 K00001 - gmx:100819938 587.415