Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01191 ATGTTCACAGCACCTTTTCCTACATCCACTGTTACTCTCTCCGGTGAAAGCGTAACCTCACCGCCGCGCCACGTCAGATTCCGGTCAGTAGTATCGTTCGCCACCGCCACTTTCACGGAGGAGCAACAACATAAGGCAGCTCCGTATCTGAGACCTCATCACGGGATGGCTTTGAGCGCGACGCTGTACGACATTCTGGGGATCCGCGCCACGGCGTCCGGCGAGGAAATCAGGGCGGCGTACCGGCGACTGGCGAGGGTGTGCCACCCTGACGTGGCGCCGGTGGAGCGAAAGGAATCCTCTGCGGGCGAGTTCATGAAGATCCATGCTGCGTACTGCACGCTCTCGGATCCCGAGAAGCGCGACAGCTACGATAGAAGCTTGTTCCGGCGCCAGCAGCGACCGGTCAAGACGACGTCGTCGGGGGCTTCCGGCTACGGTGGGCGGAACTGGGAAACGGACCAGTGTTGGTAG 474 0.6097 MFTAPFPTSTVTLSGESVTSPPRHVRFRSVVSFATATFTEEQQHKAAPYLRPHHGMALSATLYDILGIRATASGEEIRAAYRRLARVCHPDVAPVERKESSAGEFMKIHAAYCTLSDPEKRDSYDRSLFRRQQRPVKTTSSGASGYGGRNWETDQCW 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01191 157 MobiDBLite consensus disorder prediction 130 157 - -
Gma16g01191 157 SMART dnaj_3 60 120 IPR001623 -
Gma16g01191 157 CDD DnaJ 61 117 IPR001623 -
Gma16g01191 157 SUPERFAMILY Chaperone J-domain 61 131 IPR036869 -
Gma16g01191 157 MobiDBLite consensus disorder prediction 133 157 - -
Gma16g01191 157 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 1 157 - -
Gma16g01191 157 Gene3D DnaJ domain 53 143 IPR036869 -
Gma16g01191 157 PRINTS DnaJ domain signature 63 81 IPR001623 -
Gma16g01191 157 PRINTS DnaJ domain signature 81 96 IPR001623 -
Gma16g01191 157 PRINTS DnaJ domain signature 100 120 IPR001623 -
Gma16g01191 157 Pfam DnaJ domain 62 125 IPR001623 -
Gma16g01191 157 ProSiteProfiles dnaJ domain profile. 61 128 IPR001623 -
Gma16g01191 157 PANTHER DNAJ PROTEIN HOMOLOG-LIKE 1 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01191 Gma-Chr16 29529837 29530834 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01191 63 125 C2H2 Transcription Factor Family AT1G74250 43.284 3.76e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01191 - - gmx:100795760 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01191 16 29529837 29530834 Gma16g01191 16 29529837 29530834 ECH
Gma16g01191 16 29529837 29530834 Gma12g00291 12 2309127 2309984 ECH
Gma02g00438 02 4452199 4452813 Gma16g01191 16 29529837 29530834 ECH
Gma12g00291 12 2309127 2309984 Gma16g01191 16 29529837 29530834 ECH