Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01186 ATGAGTGCTTCAACTCATGACCAATTTGCTGCCACTCTGATCTTCCTATTTTTCTCTCACTTTCTAAGAGGGTCAAATTCAGCGACATTCAGCATCGTAAACAAGTGTAGCTACCCGGTTTGGCCGGGGATTTTATCCGGCGCCGGAACGGCGCAACTCGCCACCACCGGCTTCGCCCTGCAACCCGGCCAGTCCAACGCTGTCGCGGTCCCCACCGCCTGGTCTGGCCGCCTGTGGGGCCGGACCCTGTGCTCCACGGACTCCGCCGGAAAATTCTCCTGCGTCACCGGAGACTGCGGATCCTCCGCCGTGGAATGCGGCGGCGGAGGCGCCGTCCCACCGGCCACACTGGCGGAGTTCACCTTGAACGGCGCGGGGGGACTGGACTTCTACGACGTCAGCGTGGTGGACGGCTACAACCTCCCCATGCTGGTGGAGGCGCGCGGCGGCGGGAACTGCACAGCGACGGGGTGCGCGGCGGACTTGAATGGAGGGTGTCCGGCGGAGCTGAAGGTGAAGACGGTGGCGAGTGGTGAGGGCGTGGCGTGCAAGAGCGCGTGTGAAGCGTTCGGGGATCCGCGGTATTGTTGTAGCGGACGTTACGCGACGCCTGAGACATGCAAGGCGAGCTCGTACTCGCAGCTGTTCAAGAGCGCGTGCCCACGCGCTTATAGCTACGCCTACGATGATGCCACCAGCACCTACACTTGTGCCTCCGCGGATTACCGCATCACTTTCTGTCCCTCGACCTCCAAAAGTTCGATAAAGTCAGGGAGTGGGAAATTCCCAGTAGCAGTAGATATCTCAGTTGGCCATGCTTATGCTGACAAATCAGCCAATGTCATGCTAGTAGCTATTAGCGCTGTTTTATTAACAATATTGTGGCAACAACTCAATTAG 900 0.59 MSASTHDQFAATLIFLFFSHFLRGSNSATFSIVNKCSYPVWPGILSGAGTAQLATTGFALQPGQSNAVAVPTAWSGRLWGRTLCSTDSAGKFSCVTGDCGSSAVECGGGGAVPPATLAEFTLNGAGGLDFYDVSVVDGYNLPMLVEARGGGNCTATGCAADLNGGCPAELKVKTVASGEGVACKSACEAFGDPRYCCSGRYATPETCKASSYSQLFKSACPRAYSYAYDDATSTYTCASADYRITFCPSTSKSSIKSGSGKFPVAVDISVGHAYADKSANVMLVAISAVLLTILWQQLN 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01186 299 PANTHER OS09G0536300 PROTEIN 20 263 - -
Gma16g01186 299 CDD TLP-PA 29 247 - -
Gma16g01186 299 ProSiteProfiles Thaumatin family profile. 27 248 IPR001938 -
Gma16g01186 299 PRINTS Pathogenesis-related protein signature 29 41 IPR001938 -
Gma16g01186 299 PRINTS Pathogenesis-related protein signature 77 88 IPR001938 -
Gma16g01186 299 PRINTS Pathogenesis-related protein signature 129 145 IPR001938 -
Gma16g01186 299 PRINTS Pathogenesis-related protein signature 238 247 IPR001938 -
Gma16g01186 299 Gene3D Thaumatin 28 248 IPR037176 -
Gma16g01186 299 Pfam Thaumatin family 34 248 IPR001938 -
Gma16g01186 299 SMART tha2 30 248 IPR001938 -
Gma16g01186 299 PIRSF PR5 1 292 IPR001938 -
Gma16g01186 299 PANTHER OS03G0233200 PROTEIN 20 263 IPR001938 -
Gma16g01186 299 SUPERFAMILY Osmotin, thaumatin-like protein 28 249 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01186 Gma-Chr16 29435981 29439288 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01186 9 249 Receptor kinase-like Gene Family AT5G38280 51.012 1.14e-84 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01186 - - gmx:100809419 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01184 16 29370996 29373411 Gma16g01186 16 29435981 29439288 ECH
Gma17g02468 17 42718696 42722641 Gma16g01186 16 29435981 29439288 ECH
Gma16g01186 16 29435981 29439288 Gma16g01186 16 29435981 29439288 ECH
Gma16g01186 16 29435981 29439288 Gma12g00294 12 2346936 2350185 ECH
Gma12g00294 12 2346936 2350185 Gma16g01186 16 29435981 29439288 ECH