Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01182 ATGGGTTCTATTGGAATTGAGAGCTCGGGACCCGAGGTTGTCACAGTTGATGTACATGCAACCAAGGATCTGATCCAGACCAGTCATGTTTATCTGGATGTCAGGACGGTGGAAGAGTTCCAGAAAGGACATGTGGATGCAGAGAAGATCATTAACATTCCGTACATGTTTAATACACCGGAAGGCAGAGTGAAGAATCCAGAATTTCTTAAGGAGGTTTCATCTGCTTGTAAGAAAGAAGATCACATCATCGTGGGTTGTCAAAGTGGAGTGAGATCTCTATATGCAACTGCGGATCTTCTGACCGAAGGATTTAAGGATGTGAGCAACATGGGAGGAGGATATATGGACTGggttaaaaaagaatttccagtgaaagcacctttggaTGACAATTTCAAACCTCAAGTCGAAGATATGCGGAAGATCTTGGGGGTGGAAGCGACAATGAGTAAGGAACATGACGAAGCCATCTTCATCTTCAAGATCATCCTTGTCACCATCGTCAACGTCAAGATGTCTCTAGCACAAATGACGTTCTTGTACATGATGAAGAGGAGGTTGTCACTTGAGATCTATATTCCAAGATCTTTTTCCCTCTCCTTGGAATAG 612 0.4118 MGSIGIESSGPEVVTVDVHATKDLIQTSHVYLDVRTVEEFQKGHVDAEKIINIPYMFNTPEGRVKNPEFLKEVSSACKKEDHIIVGCQSGVRSLYATADLLTEGFKDVSNMGGGYMDWVKKEFPVKAPLDDNFKPQVEDMRKILGVEATMSKEHDEAIFIFKIILVTIVNVKMSLAQMTFLYMMKRRLSLEIYIPRSFSLSLE 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01182 203 PANTHER THIOSULFATE SULFURTRANSFERASE 18 11 129 IPR044684 GO:0003824
Gma16g01182 203 CDD RHOD 30 119 - -
Gma16g01182 203 PANTHER THIOSULFATE SULFURTRANSFERASE 18 11 129 - -
Gma16g01182 203 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 13 125 IPR036873 -
Gma16g01182 203 Gene3D - 7 127 IPR036873 -
Gma16g01182 203 SMART rhod_4 16 124 IPR001763 -
Gma16g01182 203 Pfam Rhodanese-like domain 22 120 IPR001763 -
Gma16g01182 203 ProSiteProfiles Rhodanese domain profile. 29 127 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01182 Gma-Chr16 29331446 29340974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01182 3 126 Sulfurtransferasese or Rhodanese AT5G66170 56.452 8.97e-50 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01182 - K15692 gmx:100792251 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01182 16 29331446 29340974 Gma16g01182 16 29331446 29340974 ECH
Gma16g01182 16 29331446 29340974 Gma02g00428 02 4365621 4367617 GST
Gma01g01690 01 52553773 52555642 Gma16g01182 16 29331446 29340974 PCT
Gma11g00708 11 5960094 5961607 Gma16g01182 16 29331446 29340974 PCT
Gma01g01654 01 52223153 52225288 Gma16g01182 16 29331446 29340974 PCT
Gma16g01182 16 29331446 29340974 Gma01g01690 01 52553773 52555642 PCT
Gma16g01182 16 29331446 29340974 Gma11g00708 11 5960094 5961607 PCT