Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01148 ATGCTATCAAGGTTGATGGACTTTCTGACTGCCTGCTGGCGGCGAAGATCCTTCTCCGACGGCAAGGGTGGTTCCGAGGTTACGGGGCGGAAGGAAGGGCTGCTGTGGTACAAGGATGCGGGGCAGCACTTGTTTGGTGAATACTCAATGGCTGTTGTCCAGGCCAACAACCTGCTCGAGGACCAGAGCCAGATTGAGTCTGGTCCTCTCAGCCTGCTTGACACTGGCCCTTATGGGACCTTTGTTGGTGTATATGATGGACACGGTGGACCCGAGACGTCGCGCTACGTCTGTGATCATCTCTTCCAACATCTAAAACGATTTGCATCTGAGCAGAAGTCCATGTCTGAGGAGGTTATTCGGAAGGCATACCAAGCCACAGAAGAAGGTTTTTTGTCAGTGGTTACCAAACAGTGGCCCATGAATCCCCAAATTGCTGCTGTGGGATCTTGTTGTTTGGTTGGTGTGATTTGTGGTGGTATCCTCTACATTGCTAACCTTGGCGATTCCCGTGCTGTGCTTGGCCGGGTTGTCAGAGCAACCGGGGAGGTTTTGGCGATCCAGCTTTCGTCAGAGCATAATGTGGCCAGAGAATCTGTGAGACAAGAGATGCATTCTTTGCATCCGGATGACTCAAAAATTGTGGTTCTAAAGCACAATGTATGGCGGGTGAAGGGTCTGATACAGATTTCTAGATCCATTGGCGATGTTTACCTAAAAAAGGCTGAATTCAACAAGGAACCATTGTATGCTAAGTTCCGTGTGCGGGAAGGTTTTAAGAGGCCCATTTTGAGCTCTGACCCATCAATTTCCGTTCATGAAATTCAACAGCATGATCAATTTCTCATATTTGCTTCTGATGGTCTTTGGGAACACCTTAGCAATCAGGATGCTGTTGATATAGTTCAAAACAACCCACACAATGGAATTGCTCGGAGGCTCATCAAAGCTGCTTTGCAAGAAGCAGCAAAAAAGAGAGAGATGAGGTACTCTGATTTGAAGAAAATTGACCGTGGTGTCCGCCGGCATTTCCACGATGACATCACAGTTGTAGTTGTATTTCTTGACTCCAATCTTGTCAGCAGAGCCAGCTCGGTAAGAGGTCCTCCTTTATCGGTGAGAGGAGGTGGTATTCCCCTACCTTCTAGAACTTTGGCTCCCTGTGCTGCACCTATGGAAACTTAG 1185 0.4827 MLSRLMDFLTACWRRRSFSDGKGGSEVTGRKEGLLWYKDAGQHLFGEYSMAVVQANNLLEDQSQIESGPLSLLDTGPYGTFVGVYDGHGGPETSRYVCDHLFQHLKRFASEQKSMSEEVIRKAYQATEEGFLSVVTKQWPMNPQIAAVGSCCLVGVICGGILYIANLGDSRAVLGRVVRATGEVLAIQLSSEHNVARESVRQEMHSLHPDDSKIVVLKHNVWRVKGLIQISRSIGDVYLKKAEFNKEPLYAKFRVREGFKRPILSSDPSISVHEIQQHDQFLIFASDGLWEHLSNQDAVDIVQNNPHNGIARRLIKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDSNLVSRASSVRGPPLSVRGGGIPLPSRTLAPCAAPMET 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01148 394 Gene3D - 34 365 IPR036457 -
Gma16g01148 394 ProSiteProfiles PPM-type phosphatase domain profile. 44 355 IPR001932 -
Gma16g01148 394 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Gma16g01148 394 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Gma16g01148 394 SMART PP2C_4 39 353 IPR001932 -
Gma16g01148 394 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 386 - -
Gma16g01148 394 CDD PP2Cc 45 355 IPR001932 -
Gma16g01148 394 Pfam Protein phosphatase 2C 80 324 IPR001932 -
Gma16g01148 394 PANTHER ALPHABET, ISOFORM E-RELATED 5 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01148 Gma-Chr16 28644478 28649805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01148 1 383 PP2C-type Phosphatase Gene Family AT3G51370 77.865 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01148 K01102 - gmx:100782689 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01148 16 28644478 28649805 Gma02g00407 02 4175435 4179505 GST