Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01147 ATGAAAAGTAGGAGTGGATCTGCTCATAAGATGTTGCTGGAATTTATTGCTGGCATTTTAACAACAATGGTAGGGGCCTTACTCTATTGCCTCTTCAGGAGAAAGGTCATTCCATTTCTTAAGCAACGAAAGACTTTGAAAGGAAAGGAACATAAAAGCTTTGAATATGATAAAATATCATTAAGGTATTTTGATTTTAAGGAACTAGAGAGAGCAACCAAAAATTTTAGCCAAGATTGCTTGCTGGGTTCTGGTGCATTTGGAAATGTCTACAAAGGAACCTTTGACTTAGAAGGAACACTAGCCATTAAGAGAGCTCATTCTGAATCATTCTCAAGTGTGGAAGAATTCAGAAATGAAGTTAGGCTCCTTTCAGCTGTAAGGCACAGGAATCTTATTGGTCTGATTGGATATTGTGAAGAACCAGGACGACATGGAGCCAAAATACTAATCTATGAATATGTTCCAAATGGTTCACTGCTTGAGTACATCAAGGGAAACGAAACGAGCTTAACTTGGAAGCAAAGACTAAACATAGCAATAGGAGCAGCAAGAGGCATAGCTTATTTGCATGAAGGGGTGAAACCAAGCATAATTCACCGTGACATCAAACCAAGTAACATCCTATTAGGGGAAGGTTTTGAGGCTAAGGTTTCAGATTTTGGTCTAGTAAGATTAGGGCCAACTGGTGATCAATCACATGTCAGCAGCCAGATTAAAGGGACACCAGGGTACCTTGACCCTGCCTATTGTTTAAGCTTTCATTTGACCAAATTCAGCGACGTTTATAGCTTTGGTATCATACTTTTGCAACTTGTTTCAGCTAGACCTGTGGTGGATTCCGCTGTAAACCAAAGTAATCAACATATTATTGAATGGGCAAGGCCAAGCTTAGAGAAGGGTAGTGTTGAAGAAATCATAGATGCAAATCTACTATGTCAAAGTGAGCCGTGCAACATGGAAGTTATGCTAAAGATGGGACAACTTGGTTTAAGATGTGTGGTTGAAGAACCAAAACATCGCCCAACAATGACACAGGTGTGTCAAGAACTAGAGCAAGCCCTCCATTCAGCTGATGATAGCTTCAATAACAAGCAGTCTCCAAAGCGGTTCCATACACCAATTGGCTCATCCCAGCAATCAACAAAGTCAGAGACTCAGCGATCAGTTGAATCATACGATTGTTCACAAAGCTTTGTTAGTATTGACAGTGTTGGATTACAGAAATTTCATGTTGATATGGATAGTTTCTCCTTTAAGAGCACAGACTTAAGGTGCCTAGAAAATAATAGTATCAGCATTGACATGGATAGAATATAA 1320 0.3955 MKSRSGSAHKMLLEFIAGILTTMVGALLYCLFRRKVIPFLKQRKTLKGKEHKSFEYDKISLRYFDFKELERATKNFSQDCLLGSGAFGNVYKGTFDLEGTLAIKRAHSESFSSVEEFRNEVRLLSAVRHRNLIGLIGYCEEPGRHGAKILIYEYVPNGSLLEYIKGNETSLTWKQRLNIAIGAARGIAYLHEGVKPSIIHRDIKPSNILLGEGFEAKVSDFGLVRLGPTGDQSHVSSQIKGTPGYLDPAYCLSFHLTKFSDVYSFGIILLQLVSARPVVDSAVNQSNQHIIEWARPSLEKGSVEEIIDANLLCQSEPCNMEVMLKMGQLGLRCVVEEPKHRPTMTQVCQELEQALHSADDSFNNKQSPKRFHTPIGSSQQSTKSETQRSVESYDCSQSFVSIDSVGLQKFHVDMDSFSFKSTDLRCLENNSISIDMDRI 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01147 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Gma16g01147 439 Gene3D Transferase(Phosphotransferase) domain 1 155 377 - -
Gma16g01147 439 Gene3D Phosphorylase Kinase; domain 1 38 154 - -
Gma16g01147 439 Pfam Protein tyrosine and serine/threonine kinase 81 351 IPR001245 GO:0004672|GO:0006468
Gma16g01147 439 ProSiteProfiles Protein kinase domain profile. 76 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01147 439 CDD STKc_IRAK 82 353 - -
Gma16g01147 439 SUPERFAMILY Protein kinase-like (PK-like) 55 352 IPR011009 -
Gma16g01147 439 SMART serkin_6 76 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01147 439 MobiDBLite consensus disorder prediction 362 388 - -
Gma16g01147 439 PANTHER OS01G0750732 PROTEIN 15 400 - -
Gma16g01147 439 ProSitePatterns Protein kinases ATP-binding region signature. 82 104 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01147 Gma-Chr16 28638986 28641801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01147 62 389 Receptor kinase-like Gene Family AT1G30570 41.983 2.65e-80 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gma16g01147 PK_Tyr_Ser-Thr 9.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01147 - - gmx:106794267 877.856
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01147 16 28638986 28641801 Gma02g00406 02 4171093 4173770 GST