Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01141 ATGTGTTCAATAAACATTTTAATTGGAAGCAGATATGTTGGAGGATCCTTTGACGTTGAGTCCCTCGTGGAGAATTTACTTGGTCAACTTGCTGGTCACCAAGCAATTTTGGTGAATGTATATGATATCATAAAATCTACTGACCACTTAATCATGTATGGAAACCAAAACGAAGAAGGTGATATGTCTCTTATCCATGAAAGAATGCTTGGTCTTCTTCTAAAGATAGAATTGAGTTCAACTCAACGTGATTATGCCCAGACTGCTCAAGCATGTGGGAAGGCTCTAATAGCATTAATAAATGAGGTACTTGATCGGGCTAAAATTGAAGCTGGCAAGTTAGAGCTAGAAGCTGTTCCATTTGACATTCATTCCATACTTGATGATGTCCTTTCTCTTTTTTCTGTGAAGTCTCGGAACGTAGGTTTAGAGGTACGTGTAACTATTGCTAAACCAATTGTGAAGGCCTAA 471 0.3822 MCSINILIGSRYVGGSFDVESLVENLLGQLAGHQAILVNVYDIIKSTDHLIMYGNQNEEGDMSLIHERMLGLLLKIELSSTQRDYAQTAQACGKALIALINEVLDRAKIEAGKLELEAVPFDIHSILDDVLSLFSVKSRNVGLEVRVTIAKPIVKA 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01141 156 PANTHER HISTIDINE KINASE 4 11 70 - -
Gma16g01141 156 PANTHER HISTIDINE KINASE 4 69 151 - -
Gma16g01141 156 Gene3D - 89 156 IPR036890 -
Gma16g01141 156 Gene3D CHASE domain 7 85 IPR042240 -
Gma16g01141 156 PANTHER TWO-COMPONENT HISTIDINE KINASE 11 70 - -
Gma16g01141 156 PANTHER TWO-COMPONENT HISTIDINE KINASE 69 151 - -
Gma16g01141 156 Coils Coil 97 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01141 Gma-Chr16 28514827 28515860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01141 12 70 Histidine Kinase Gene Family AT2G01830 71.186 8.60e-23 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01141 K14489 - gmx:100818481 138.272