Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01138 ATGGCAAAGCTGGCGGAACAAGCCAAGCGCTACGAGGAGATGGTGGAGTTCATGGAGAAGGTCTCCTCTTTCGTCGAGAACGAGAAGCAGACCGTGGAGGAGCGAAAGGAGGAGAGCCACGACAACAAGGACCACATGGCCGGAATCCTCAAACTCCTCGACACGCGCCTCGTCCCCTTCACCGCCTCCAAGGTCTTCTACGTCAAGATGAAAGGAGACTACCAAAGGTGTCACCATTTTGGGAACAATTCCAAGCTTAGTAAAAGCTTGGAAGAGTACGCAATGTATGGAGGGCTTGGATTGGACAAAGATAAATCGCCGCAACAAGATAACTCGTTTGATTGTGGTCTCTTTCTACTTCACTATATAGAGCTCTTCCTGGATGAAGCTCCATTTAATTTCTACCCATTCAAACTAACCAAGTTCTCCAACTTTGAAATGCAATTCACTCTATTGTCAGCACCATTCCCTATGGATCCTCAATCTTTTAACCCTTCAGACATGGTTCTTAAGGAGCATTTTGAACCGAGGGCTATAGCTGGAACTTCACTGGGACATTGCCAATCTTTGGACCAGCAATCATCTGATCGTTATCTCAATGGGTCAAGAGTGGGCAGAGGGGCAACAAAGAGGTTGGGCATGATGATGGCGATACTGGTTGTCATAGAGGAACCAGAAAAGACCACTCCCATTAAATGA 699 0.4707 MAKLAEQAKRYEEMVEFMEKVSSFVENEKQTVEERKEESHDNKDHMAGILKLLDTRLVPFTASKVFYVKMKGDYQRCHHFGNNSKLSKSLEEYAMYGGLGLDKDKSPQQDNSFDCGLFLLHYIELFLDEAPFNFYPFKLTKFSNFEMQFTLLSAPFPMDPQSFNPSDMVLKEHFEPRAIAGTSLGHCQSLDQQSSDRYLNGSRVGRGATKRLGMMMAILVVIEEPEKTTPIK 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01138 232 SUPERFAMILY 14-3-3 protein 1 79 IPR036815 -
Gma16g01138 232 PANTHER ULP1 PROTEASE FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 105 145 - -
Gma16g01138 232 Gene3D - 1 35 IPR036815 -
Gma16g01138 232 Gene3D - 104 140 - -
Gma16g01138 232 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 105 145 - -
Gma16g01138 232 Coils Coil 1 21 - -
Gma16g01138 232 SUPERFAMILY Cysteine proteinases 104 140 IPR038765 -
Gma16g01138 232 PANTHER ULP1 PROTEASE FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 160 213 - -
Gma16g01138 232 Pfam Ulp1 protease family, C-terminal catalytic domain 103 149 IPR003653 GO:0006508|GO:0008234
Gma16g01138 232 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 160 213 - -
Gma16g01138 232 SMART 1433_4 1 166 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01138 Gma-Chr16 28475174 28480887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01138 1 76 14-3-3 family AT1G78300 46.341 7.75e-22 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01138 K06630 K08596 gmx:102664785 101.293