Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01135 ATGGGTGTACCCCAAAAATGGTTCAGAAATATAGTTCGGGGCAGATTCCTCAGATCATCCAACAAAGACATCGTTCTCGTTCTCCCTCGCACAAGTATTTGCACCAATGAATGCGAAGAAGCCATGCTTAGGAATGAAGAGTTCAGTTTCCCAACACCAATTTCTTCAATCACCAAGGAAGATGCTTCGGCCATTAAGATCCAAGCTTACTTCAGGGGACATCTTGCCAGACGAGCATATAAGGCTTTGAAGAGCCTAGTGAAGCTGCAAGCATTAGTTCGTGGGGTGTGGGTGAGGAAACAATCACGTATAGCAATGCAGTGTATGCACGCACTTGTACGATTACAAGTCAGGGTGGCTAAGGGGAAGAAGACTATTGAGAAGGTTTTGCAATCCAAGGAGAAGAAGGGGAGAGACTTAGAGGTAGACAGGTGGAAATGGTTGGATCTAAAGTTAGAGGTGGGAGACACTAGTTGGCTCCATAGAAGCTCGGTGGTTTTATTGAGAGATCTGATGAAGATGGACTTGTGA 531 0.4539 MGVPQKWFRNIVRGRFLRSSNKDIVLVLPRTSICTNECEEAMLRNEEFSFPTPISSITKEDASAIKIQAYFRGHLARRAYKALKSLVKLQALVRGVWVRKQSRIAMQCMHALVRLQVRVAKGKKTIEKVLQSKEKKGRDLEVDRWKWLDLKLEVGDTSWLHRSSVVLLRDLMKMDL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01135 176 Gene3D - 57 111 - -
Gma16g01135 176 ProSiteProfiles IQ motif profile. 84 111 IPR000048 GO:0005515
Gma16g01135 176 ProSiteProfiles IQ motif profile. 60 88 IPR000048 GO:0005515
Gma16g01135 176 SMART iq_5 59 81 IPR000048 GO:0005515
Gma16g01135 176 SMART iq_5 82 103 IPR000048 GO:0005515
Gma16g01135 176 PANTHER OS04G0561100 PROTEIN 6 120 - -
Gma16g01135 176 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 104 IPR027417 -
Gma16g01135 176 PANTHER IQ-DOMAIN 5-RELATED 6 120 - -
Gma16g01135 176 Pfam IQ calmodulin-binding motif 84 101 IPR000048 GO:0005515
Gma16g01135 176 Pfam IQ calmodulin-binding motif 62 81 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01135 Gma-Chr16 28444715 28447153 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01135 58 119 IQD Protein Family AT3G51380 75.806 2.22e-29 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01135 - - gmx:100788207 236.884