Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01127 ATGGAGGCCAAAAATCATGGTGGGGTCGCATATGGAGGCTGGAAATCACAGCAGCGTCACATTTGGAGGTCGGAAATAGCGACTGCGACGCTTCATGAAGAAGTTGTAGATCACCCTCTAATAACCTTCCTACACCATCTCATCACGATGACTCCTCAAATCATGAGCTTTGGAATTGCTAATATTATTCATAAGCAAATAACAAGTGATTGGCACAGCCTTTGCTTTGAACATACTCTTCCACATCCCTGTATGGGCAAGAGTTCTAATAACTGGTTGCAGCACCCTCTTATTTCTTGGTCTGCAGAGATTTGGGGTAAGGAAGTTAGAACTGCTGATATCAATCCTAGTTTTTGTAATGGCTGGATGCTTCTTTGGGGAAACGAGCTAGTTTTTGATGCATGTAGATACTTTCTCATGGAAAGTGGATTCGCACTGTTTGTGGCATTTCTAATCAATGTTGCAGTGGTTTCTGTGTCCGGAACGGTTTGCTCTGCCGACAATCTTTCTGCAGAAAATGTTGATCATTGCAGCGATCTTACCCTTAACTCTGCTTACTTCCTTCTCAAGGCTTGTGAAAAGTTAAACCAGATAGAACTTTCAGACTGTGAAATATATGCTTCTTGTGAACCTTGCCCTATGTGCTTTGGAGCAATTCACCTCTCAGGAGTTAAGAGGTTGGTTTATGGAGCAAAGGCAGAGGCTGCAATTGCTATTGGATTCGATGACTTCATTTCAGATGCATTGCGAGGCACTGGATTCTACCTGAAAGCACAATTGGAGATTAAAAGGGCTGATGGCAAAGCGGCAAATTTGCTAAAGAAGTTTAATCAATTTAATACTTAA 846 0.4208 MEAKNHGGVAYGGWKSQQRHIWRSEIATATLHEEVVDHPLITFLHHLITMTPQIMSFGIANIIHKQITSDWHSLCFEHTLPHPCMGKSSNNWLQHPLISWSAEIWGKEVRTADINPSFCNGWMLLWGNELVFDACRYFLMESGFALFVAFLINVAVVSVSGTVCSADNLSAENVDHCSDLTLNSAYFLLKACEKLNQIELSDCEIYASCEPCPMCFGAIHLSGVKRLVYGAKAEAAIAIGFDDFISDALRGTGFYLKAQLEIKRADGKAANLLKKFNQFNT 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01127 281 Pfam MafB19-like deaminase 165 236 IPR028883 GO:0002100|GO:0008251
Gma16g01127 281 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 50 278 - -
Gma16g01127 281 CDD nucleoside_deaminase 190 243 - -
Gma16g01127 281 SUPERFAMILY Cytidine deaminase-like 188 245 IPR016193 GO:0003824
Gma16g01127 281 Gene3D Cytidine Deaminase, domain 2 169 280 - -
Gma16g01127 281 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 50 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01127 Gma-Chr16 28300990 28304441 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01127 133 190 Inorganic Solute Cotransporters AT1G80830 63.793 5.23e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01127 - - gsj:114389910 483.026