Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01114 ATGGCTCATCTGAGCCACAAGACCTTGGTTTATCTTCCAGAAATGAGGCCTGAACATGAAGCTGAGGAAGGCCAACCCAGAAAAAGTCTTGGTTCTTTTTCTTCTTGGCCTCATCGTTTGGAGAATGTTTTCCCCGTTTATGCCATGGGAACTTCCAACCCTGCAGTCTTGGATTCTTCACTTCACACTTCTGATTGTCTTGATCCTATTTGGGATGCTGTCAGAGAAGAAGCCAAGTTAGAGGCAGAAAAGGAGCCAATTTTGAGTAGCTTCTTCTATGCCACTATTCTGTCTCATGATTGCTTGGAGCAAGCATTGGCTTTTGCTCTTGCCAACCGACTCCAAAACCCTACTCTTTTGGCAACTCAGCTGATGGATATATTTTCTAATGTGATGAAGCATGATAAAGGTATCCAGCAATCCATTCGCTTGGATATTCAGGCATTTAAAGATCGGGATCCTGCTTGTTTGTCATATTGCTCAGCACTTTTATATATGAAGGGCTACCAGTCTTTGCAAGTATATCGAGTAGCTCATGCTTTGTGGGGCCAGGGACGCAAAGTTTTGGCCTCAGCTTTGCAAAGTCGAGTTAGTGAGGTTTTTGGAGTTGATATACATCCAGCTGCAAAAATTGGGGATGGAATTTTAGTAGATCATGGGACAGGTGTTGTTATTGGTGAAACAGTTGTTGTTGGAAACAGAGTTTCATTGATGCAAGGTGTAACTTTTGGCGGCACGGGTAAGGAAACAGGTGATCGGCATCCCAAAATTTCTGAAGGTGTTCTAATTGGAGCACATGCAACTATACTTGGGAATATAACAATTGGTGAATGTGTGATGATAGCTGCTGGCTCCCTTGTGTTACAAGAGGTTCCTCCTCACAGCATTGTGGCTGGTGTACCAGCAAAGGTTATTGGAAGAGTACATGAGCATTATCCATCCTTAACCATGCAGCAAGATGAAAATAAGCATCTATCGGAGGAGTTTTTCTATAGCAAAGATGAAACCACAGAAAATTACTACATAAATTGA 1032 0.4254 MAHLSHKTLVYLPEMRPEHEAEEGQPRKSLGSFSSWPHRLENVFPVYAMGTSNPAVLDSSLHTSDCLDPIWDAVREEAKLEAEKEPILSSFFYATILSHDCLEQALAFALANRLQNPTLLATQLMDIFSNVMKHDKGIQQSIRLDIQAFKDRDPACLSYCSALLYMKGYQSLQVYRVAHALWGQGRKVLASALQSRVSEVFGVDIHPAAKIGDGILVDHGTGVVIGETVVVGNRVSLMQGVTFGGTGKETGDRHPKISEGVLIGAHATILGNITIGECVMIAAGSLVLQEVPPHSIVAGVPAKVIGRVHEHYPSLTMQQDENKHLSEEFFYSKDETTENYYIN 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01114 343 Gene3D serine acetyltransferase, domain 1 54 203 IPR042122 -
Gma16g01114 343 SUPERFAMILY Trimeric LpxA-like enzymes 69 318 IPR011004 -
Gma16g01114 343 CDD LbH_SAT 201 301 IPR045304 -
Gma16g01114 343 Pfam Bacterial transferase hexapeptide (six repeats) 254 287 IPR001451 -
Gma16g01114 343 PANTHER SERINE ACETYLTRANSFERASE 6 333 - -
Gma16g01114 343 PANTHER SERINE ACETYLTRANSFERASE 2-RELATED 6 333 - -
Gma16g01114 343 SMART SATase_N_2_a 70 174 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gma16g01114 343 TIGRFAM cysE: serine O-acetyltransferase 142 303 IPR005881 GO:0005737|GO:0006535|GO:0009001
Gma16g01114 343 Gene3D Hexapeptide repeat proteins 204 334 - -
Gma16g01114 343 Pfam Serine acetyltransferase, N-terminal 70 173 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gma16g01114 343 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 263 291 IPR018357 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01114 Gma-Chr16 27992961 27996915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01114 40 330 Miscellaneous Gene Families AT2G17640 70.447 3.18e-137 391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01114 16 27992961 27996915 Gma02g00383 02 3996898 4000407 GST
Gma01g01639 01 52119537 52122745 Gma16g01114 16 27992961 27996915 PCT
Gma11g00767 11 6418684 6423674 Gma16g01114 16 27992961 27996915 PCT
Gma16g01114 16 27992961 27996915 Gma01g00118 01 1338507 1340350 PCT
Gma16g01114 16 27992961 27996915 Gma09g01938 09 45007074 45008993 PCT