Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01110 ATGCCGATGGAACTGGAGTTGGAGCTAGGTTCAACAACAATTCAACGTTCCTTCGACGCGCGCTACACGCGCCACACACGTGACTTGCTTGACGAATTGCCTGACAGCTTCACCGTCACCGACCCCTCCATCCTGGGACACCCCATCGTGTTTGCCAGCCCAGGCTTCCTCAAGCTCACGGGCTATTCCCTTCGCGAAGTCCTGGGTCGGCCCACAGCCATCTTCCAGGGCCCACTAACATTCCCAAAATCCGTAATTGAAATTCGCAAGGTTGTTAGAGAGGAGCGAAACGCGCAGGTCATTTTACCCAAAATCTGTCGTGCACTTTGTTGCCGTATAGGTACCACTTCAGAAAAAGGAAGGGTCCGGGGTGAGGGATTTCGGGTTTGA 390 0.5385 MPMELELELGSTTIQRSFDARYTRHTRDLLDELPDSFTVTDPSILGHPIVFASPGFLKLTGYSLREVLGRPTAIFQGPLTFPKSVIEIRKVVREERNAQVILPKICRALCCRIGTTSEKGRVRGEGFRV 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01110 129 ProSiteProfiles PAS repeat profile. 22 99 IPR000014 -
Gma16g01110 129 PANTHER PROTEIN TWIN LOV 1 11 102 - -
Gma16g01110 129 Gene3D PAS domain 19 108 - -
Gma16g01110 129 CDD PAS 33 75 IPR000014 -
Gma16g01110 129 PANTHER PROTEIN TWIN LOV 1-LIKE 11 102 - -
Gma16g01110 129 SUPERFAMILY PYP-like sensor domain (PAS domain) 32 101 IPR035965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01110 Gma-Chr16 27937693 27938082 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01110 21 94 AGC Kinase Gene Family AT5G58140 37.838 3.43e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01110 - - gmx:100776985 259.996