Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01097 ATGCCTTTGAATTGTATCAATATTTCAAAAGGCCACTTGTATGTGAAGAGTGATATCTATGGATTTGGTGTAGTGCTGCTTGAAATACTTACAGGCATGCGGGCACTTGACACAAATCGACCTCAAACCATGCAGAACCTAGTTGAATGGACTAAGCCTTGTCTTTCTTCCAAAAAAAAGTTGAAAGCCATAATGGATGCTAAGATAGAGGGTCAATATTCACTTGAGGCAGCATGGCAAGCAGCAAAACTTACTCTAAAATGCCTAAAATCTGTCCCTGAAGAACGTCCTTCTATGAAAGATGTAGTTGAGGCATTGGAAGCCATTGAAGCTATCCAAAACCCACAATTCGCAGCGTACATCTCATCCACCCCCTCGGCAGGGTCGTAA 390 0.4231 MPLNCINISKGHLYVKSDIYGFGVVLLEILTGMRALDTNRPQTMQNLVEWTKPCLSSKKKLKAIMDAKIEGQYSLEAAWQAAKLTLKCLKSVPEERPSMKDVVEALEAIEAIQNPQFAAYISSTPSAGS 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01097 129 SUPERFAMILY Protein kinase-like (PK-like) 12 108 IPR011009 -
Gma16g01097 129 Pfam Protein tyrosine and serine/threonine kinase 8 106 IPR001245 GO:0004672|GO:0006468
Gma16g01097 129 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 8 113 - -
Gma16g01097 129 PANTHER OS01G0588500 PROTEIN-RELATED 8 113 - -
Gma16g01097 129 ProSiteProfiles Protein kinase domain profile. 1 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01097 129 Gene3D Transferase(Phosphotransferase) domain 1 3 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01097 Gma-Chr16 27761811 27762200 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01097 11 115 Receptor kinase-like Gene Family AT4G02010 38.889 4.68e-25 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma16g01097 PK_Tyr_Ser-Thr 5.1e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01097 - - gmx:100818310 238.424