Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01096 ATGGCAACGCTCATCTTTTATTGGTTAATTTCGTCGGTCAACTGCATGGGTCTCCGCTTCTCCTCTGGCTCGGCACCTCACTCCTCTTCCCTCAACGGCTCTCACTGTTCAGGCAAGTCTTCAACTTTTCCTCACCCTTTCAATATTCTGGGCGAAACACGACATGGGTCGTTTCCCTTTTCATCGAATGCGAATTTTCCCATGATGGGTTCGATTCCTCTGTTTTCAGGTTCAGCAAGAACTGGCTGCAAGAACGTGGGGTTCTCCGCAACCGGGAAGAGTCAGTTTTCGGAGATTGCGAGTGGAAGCGACGATCGCGAAGAGTCTCTTGGTCGGATTCTGAAATGGCCAAACTTGAAGGTGTTTAGTTTTGAGGAGCTGATTTCTGCCTCAAGGCGTTTCAGGTATGACATACAGGGGTTAGTGATCGGTAAAGGTTGTTTTGGCCCAGTTTACAAGGGATGTTTGGATGAGAATACCCTTACCCCTGCCAAAGTAGGCTATGGAATGGCCGTTGCGATCAAAATGTTTAACCAAGATTACTTCCGAGGGTTTGAAGAGTGGCAGTCAGAAGTAAACTTTTTAGGAAGGCTTTCTCACCCCAACCTGGTTAATCTATTGGGATACTGTTGGGACGAGGATAAGCTTCTTCTAGTGTATGAGTTCATGCCAAAGGGAAGCTTAGACTATCATCTATTCAGAGCAGGAAACATAACACCACTTTCTTGGAACACACGGCTTAAAATAGCTATTGGTGCAGCTCGGGGATTAGCTTTCTTGCACGCCTCTGAAAACAATGTCATATTCAGTGATTTCAAGGCCTCAAATATACTTCTTGACGGGAATTACAATGCAAAGATCTCAGATTTTGGCTTTGCTAGATGGGGGCCTTTTGAAGGAGAATCACATGTATCTACCAGGGTCATTGGCACATATGATTATGCTGCTCCAGAATACATAGCAACAGGAAATGAAAACAGACGAAGTTTTCTTAAACCAAACAGGACTTAG 1011 0.451 MATLIFYWLISSVNCMGLRFSSGSAPHSSSLNGSHCSGKSSTFPHPFNILGETRHGSFPFSSNANFPMMGSIPLFSGSARTGCKNVGFSATGKSQFSEIASGSDDREESLGRILKWPNLKVFSFEELISASRRFRYDIQGLVIGKGCFGPVYKGCLDENTLTPAKVGYGMAVAIKMFNQDYFRGFEEWQSEVNFLGRLSHPNLVNLLGYCWDEDKLLLVYEFMPKGSLDYHLFRAGNITPLSWNTRLKIAIGAARGLAFLHASENNVIFSDFKASNILLDGNYNAKISDFGFARWGPFEGESHVSTRVIGTYDYAAPEYIATGNENRRSFLKPNRT 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01096 336 PANTHER OS01G0588500 PROTEIN-RELATED 101 324 - -
Gma16g01096 336 Gene3D Phosphorylase Kinase; domain 1 143 223 - -
Gma16g01096 336 SUPERFAMILY Protein kinase-like (PK-like) 122 324 IPR011009 -
Gma16g01096 336 ProSiteProfiles Protein kinase domain profile. 137 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01096 336 PANTHER SERINE/THREONINE-PROTEIN KINASE PIX13-RELATED 101 324 - -
Gma16g01096 336 Pfam Protein tyrosine and serine/threonine kinase 142 324 IPR001245 GO:0004672|GO:0006468
Gma16g01096 336 Gene3D Transferase(Phosphotransferase) domain 1 224 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01096 Gma-Chr16 27759531 27761715 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01096 120 329 Glycoside Hydrolase AT3G07070 48.585 4.15e-59 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma16g01096 PK_Tyr_Ser-Thr 4.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01096 - - gmx:100818310 561.222