Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01095 ATGGGTGTCTGCTTCTCCTCTGGCCCGACACAGAACTCTTCTTCCCTCGACCGACCTTACTATTCAGGCAACACTAACTGCAAAAACGTGGGAATCACCGAAACCACGAGCAGCAGCACCGTAAATAGACAGTTTTCCGTGATTGTGAGTGGAAGCATCTATCGTCGTCCCCTTTCTCTTCCTCTTCCTCCACCTGATGGCCTGATTCCGAAATGGCCAAACTTGAAGGTTTTCGATTTTGAGGAGTTGAAATCTGCCACAAACAATTTCAGGCATGACACATTGCTGGGTCAAGGTGGCTTTTGCCGAGTTTACAAGGGATGGTTGGATGAGGATACCCTCGCCCCTACCAAAGCAGGCTACGGAATGGTCGTTGCCATAAAAAGGTTGAACCCCGAAAGCACGCAAGGGTTTGTCCAGTGGCAGACAGAACTAAACATGAGAAGGCTTTCTCACCCCAACCTGGTCAATTTATTGGGTTACTGTTGGGACGATGATGAGCATCTTCTTGTGTATGAGTTCATGCCAAAGGGAAGCTTAGACAATTATCTATTCAAAAGAAATCGTAACTTAGAATTACTTTCTTGGAACACACGGCTTAAAATAGCTATTGGTGCAGCTCGGGGATTAGCTTTCTTGCATGCTTCTGAAAACAACGTCATTCACAGAGATTTCAAGTCCTCAAATATACTACTTGATGGAaattacaatccaaagatctcagattttggcttggcaaaattggggccttctaagggacaatcccacaattacaatccaaagatctcagattttggcttggcaaaattggggtcttctgagggacaatcacataattacaatccaaagatctcagattttggtttggcaaaattggggccttctgagggacaatcacataattacaatccaaagacctcagattttggcttggcaaaattgggaacttctgagggacagtcacataattacaatccaaagatctcagattttggcttggaaaaattggggccttccgagggacaatcatatgtaaCTACTATGGTCTCTGGCACGTTTGGTTATGTATCTCCAGAATACTGTTTAACAGGCGCCTTGTATGTGAAGAGTGATGTCTCCGGATTTGGTGTAGTGCTACTTGAAATACTGACAGGCATGCGAACATTTGACGCAAAACGGCCAACAGGGCAGCGTAACCTAGTTGAATGGACCGAGCCTCTTCTCTCTTCCAAAAAAAAGTTGAAAACAATAATGGATACAGAGATAAAGGGTCAATATTCACTTGAGGCAGCCTGGCAAGCAGCACAACTTACTCTAAAATGCCTAAAATTTGTCCCTCAAGAACGTCCTTCTATGAAAGATGTAGTTGAGACATTGGAAGCCATTGAAGCTATCCAAAACCCACAATTTGCAATGTACATCTCAACCACCCCCTCGGCAGGGTCGTAA 1449 0.3464 MGVCFSSGPTQNSSSLDRPYYSGNTNCKNVGITETTSSSTVNRQFSVIVSGSIYRRPLSLPLPPPDGLIPKWPNLKVFDFEELKSATNNFRHDTLLGQGGFCRVYKGWLDEDTLAPTKAGYGMVVAIKRLNPESTQGFVQWQTELNMRRLSHPNLVNLLGYCWDDDEHLLVYEFMPKGSLDNYLFKRNRNLELLSWNTRLKIAIGAARGLAFLHASENNVIHRDFKSSNILLDGNYNPKISDFGLAKLGPSKGQSHNYNPKISDFGLAKLGSSEGQSHNYNPKISDFGLAKLGPSEGQSHNYNPKTSDFGLAKLGTSEGQSHNYNPKISDFGLEKLGPSEGQSYVTTMVSGTFGYVSPEYCLTGALYVKSDVSGFGVVLLEILTGMRTFDAKRPTGQRNLVEWTEPLLSSKKKLKTIMDTEIKGQYSLEAAWQAAQLTLKCLKFVPQERPSMKDVVETLEAIEAIQNPQFAMYISTTPSAGS 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01095 482 PANTHER OS01G0588500 PROTEIN-RELATED 323 466 - -
Gma16g01095 482 Gene3D Phosphorylase Kinase; domain 1 68 174 - -
Gma16g01095 482 PANTHER SERINE/THREONINE-PROTEIN KINASE PIX13-RELATED 33 256 - -
Gma16g01095 482 PANTHER SERINE/THREONINE-PROTEIN KINASE PIX13-RELATED 323 466 - -
Gma16g01095 482 SUPERFAMILY Protein kinase-like (PK-like) 322 461 IPR011009 -
Gma16g01095 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Gma16g01095 482 Pfam Protein tyrosine and serine/threonine kinase 94 249 IPR001245 GO:0004672|GO:0006468
Gma16g01095 482 Gene3D Transferase(Phosphotransferase) domain 1 175 259 - -
Gma16g01095 482 Pfam Protein kinase domain 323 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01095 482 PANTHER OS01G0588500 PROTEIN-RELATED 33 256 - -
Gma16g01095 482 Gene3D Transferase(Phosphotransferase) domain 1 320 475 - -
Gma16g01095 482 ProSiteProfiles Protein kinase domain profile. 90 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01095 482 SUPERFAMILY Protein kinase-like (PK-like) 69 253 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01095 Gma-Chr16 27755679 27759087 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01095 324 459 Glycoside Hydrolase AT3G07070 43.382 8.00e-31 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma16g01095 PK_Tyr_Ser-Thr 5.9e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01095 - - gmx:100817777 900.582