Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01094 ATGGGTGTTTGCTTCTCCTCTGGCTCGGGTCCTCACTATTCAGGTTCAGCAAGTGATGATAGCAAAAACGTGGCACCGAAAAGAGAGCTGAAATCTGCCGCAAACAATTTCAGGCCTGACACAGTGGTCAGTAAAGGTTTTCAAGAGTGGCAGTCAGAACTAAACTTTTTAGGAAGGCTTTCTCACCCCAACCTGGTCAAGTTATTGGGTTACTGTTGGGAGGATGATGATTTTTTTCTTGTGCATGAGTTCACGCCAATGGGGAGCTTGGAGAATCATCTCTTTGACAGAAATCCTAACTTTGAACCACTTCCTTGGGACACCCGGCTTAACATAGTTATCGGTGCATCTAGGGGATTGGCTTTCTTGCAGAGATTTCAAGGCCTCAAATAA 393 0.4529 MGVCFSSGSGPHYSGSASDDSKNVAPKRELKSAANNFRPDTVVSKGFQEWQSELNFLGRLSHPNLVKLLGYCWEDDDFFLVHEFTPMGSLENHLFDRNPNFEPLPWDTRLNIVIGASRGLAFLQRFQGLK 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01094 130 Pfam Protein tyrosine and serine/threonine kinase 45 125 IPR001245 GO:0004672|GO:0006468
Gma16g01094 130 PANTHER SERINE/THREONINE-PROTEIN KINASE PIX13-RELATED 45 125 - -
Gma16g01094 130 PANTHER OS01G0588500 PROTEIN-RELATED 45 125 - -
Gma16g01094 130 ProSiteProfiles Protein kinase domain profile. 1 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01094 130 MobiDBLite consensus disorder prediction 1 32 - -
Gma16g01094 130 SUPERFAMILY Protein kinase-like (PK-like) 22 125 IPR011009 -
Gma16g01094 130 Gene3D Transferase(Phosphotransferase) domain 1 6 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01094 Gma-Chr16 27725575 27726742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01094 8 124 Receptor kinase-like Gene Family AT5G39000 40.678 1.64e-21 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma16g01094 PK_Tyr_Ser-Thr 6.9e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01094 - - gmx:100794193 141.354