Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01085 ATGCCGAAAGCTAAATCCGACGCCAAAGCCGCCGATAGCAGGTTGAAGCGGAAGGGCGCTGGTGCTGGGAGGAAGCAATCGAGGAAAGCTGCTAAGGACCCTAACAAGCCGAAGAGACCTCCAAGCGCTTTCTTCGTTTTCATGTCCGAGTTCAGAGAGCAGTTCAAGAAGGAGCATCCTAACAACAAATCCGTCGCTGTTGTCGGCAAAGCTGGTGGTGAAAAATGGAAATCGCTATCTGATGCTGAAAAGGCCCCTTTCGTTGCTACTGCTGAGAAGAAGAAACAGGAGTATGAGAAAACTATTTCGGCTTACAATAAGCAATTGGAGGGAAAGAATTCAGAGGAAGACGAGTCTGACAAGTCAAAGTCTGAAGTCAATGATGACGAGGAAGATGAGGAGGAGGATGATGATGAGTAA 420 0.4786 MPKAKSDAKAADSRLKRKGAGAGRKQSRKAAKDPNKPKRPPSAFFVFMSEFREQFKKEHPNNKSVAVVGKAGGEKWKSLSDAEKAPFVATAEKKKQEYEKTISAYNKQLEGKNSEEDESDKSKSEVNDDEEDEEEDDDE 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01085 139 MobiDBLite consensus disorder prediction 122 139 - -
Gma16g01085 139 Coils Coil 88 115 - -
Gma16g01085 139 MobiDBLite consensus disorder prediction 105 139 - -
Gma16g01085 139 Gene3D High mobility group box domain 21 122 IPR036910 -
Gma16g01085 139 MobiDBLite consensus disorder prediction 1 43 - -
Gma16g01085 139 Pfam HMG (high mobility group) box 37 106 IPR009071 -
Gma16g01085 139 SUPERFAMILY HMG-box 25 108 IPR036910 -
Gma16g01085 139 MobiDBLite consensus disorder prediction 1 19 - -
Gma16g01085 139 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 37 106 IPR009071 -
Gma16g01085 139 CDD HMGB-UBF_HMG-box 37 103 - -
Gma16g01085 139 SMART hmgende2 36 107 IPR009071 -
Gma16g01085 139 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 3 137 IPR031061 -
Gma16g01085 139 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 3 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01085 Gma-Chr16 27415092 27416616 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Gma16g01085 HMG_box 4.9e-24 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01085 K25507 K22507 gmx:100499992 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01085 16 27415092 27416616 Gma16g01085 16 27415092 27416616 ECH