Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01083 ATGGGAGGCTTATTGCACATGTTTGAGTTCAATCAGGGTAGGATGGCCAAGAAAGTTCATGCCCAGAGGAGCAATAATGGTGACCTGGAAAGCTCTGGAAATGGCATGGAACTGCAAGTAGAAACATCTCAGGTCCACTGTGCAGAAGGAGAATTACCATACTCTTGTCAAGTAGAAGATGGCTGGTCAAAGAAAAATAGTTACTCAAATGTGGTTTCAGTGAAAAAACTGAACAAAGAGGATTTATCCAAACAATCAGGCACCACCAGAAATAATGCAGCAAGCCTTGTGGCAAGGTTGATGGGGATAGACACCATGCCATTGCCATTAGAGACTAATTCCGTTGTTCCATTAGATGAAAGCAAACATAAAAATATGGAGAGGAAGTTTTCAAAAAAAGGAATGAATCGAAGGGGTTCGGTTGGCAGGGGTTCCTCCAACTTTAATTCTTCTAGCCAGATGGAATTTGATTCTTTTTATCAAGACATCGATGGTGATCATGATGATGGATGCAGACAGAATTTTGGAAAACCAAGGCCTAGGGAACATCCTCAGGAAGAGGAACTCCAAAAATTCAAGAAAGAATTTGAAGCATATCAAGAATCAAGGTTTAAGGAGTGTTCAAAGGATGTTGAAATTGGAAGTGGTTCTAGGAGAATACCTTCTCAAGAGAACCTGAGGAAGGAAAAGATGCTACAGATTGCAAGTTCAAAGACAGATAGCCACACATTTAAGACAAAGCTACCTAATGGTAATATGATGGAGCCAATCCCAACTACGAAAAAAGATTTCTTTCCTTCAAGAAGTAAAACACTAAGTCGAGACTTTGAGGAGTCTTTAATGATGAAATCTGGAAGCAGATTAGATATATGTGCTTCTTCCGCTCAGATAGTTATCTTGAAGCCTGGTTCTGATAGGATTTGCAATTGCAACCATGAAGAGAATTGCATCAATTTATCAGGCACTTTACACGGGAGAAAAGGTTTAGAAGATTTTCTTGAGGAAGTGAGGGAGCGGTTGGAATGTGAACTGCAAGGGATTAGAGCTAGTGGAATTGAGACACCTTACAATGAAAAACTATCTGATGCTAAAGAGGTCAGAGAAAGTGTGACTAGAGATGCTGAACCAAATTTACTCCGCTCAGAATCAACAAGATCATATAAAAGTAAAATGCAGTTCAATGGACCAAGTTCTCCAGAACTTTTCAACATAGATACCAGAAGATTCTTGTCAGAGAGGCTAAGAAATATTGTAAATGGTGAACTGCATTTGGACATTCCTGAAGTGGCCTGTTACAATGATAGAGTTAGACTAAAGCAGGATACTACAAAGTGTGCAAATGACAAGAGCCAGTGGAGAATTTTGAAAGAGAAAAAAGAATTACAAACAGGTTCCTATAGACACAAATTAGATGACAATGTATTGTTCCACAAGGATTTGTCTCCTAGAAATCTTGAAAGATCCTTGTCTGCTCCTGCATCAGGAACATCATTTGGGAGGCTTCTTCTAGAGGACCGCCACATTTTAACGGGCGCCCTTATTCAGAGGAAGCTTGAAGCTGTTGAAGCAATGCCTGTGGATGTCAAAAAAAAGAAGAAAGATGGGTTTAATATTAAAGAAAAACTTTCCAATTTTACTCTTGGTCTCAGAGGGAAGCTGTTTGGCAAAAGGGTTCAGTCAATAGTTGAATCACATGGCAGTGAATACGGTCCAATTTTGAGAGATATCAGGAGTGGACCAACTGTTTTCATGAAATATGGTGAGAGACATGAGAACTCAACTGAGGTACCTCCTAGTCCTGCATCTATGTGCAGCTGTGTTCATGAAAAAAATTGGAGACAGACTGGATATTCAAGTTTAACATCAACTCCAGATGTATCTTCATTAGATGATATTTTTATTCCCAAGGTTTTCAGAGATATCAGCTCTGGTTTGAATGAGCTAAAGAGACAACTCAGTCAACTTGATTCCGATGGCTCTGAGGACTTCACCACTAAGCAGGAGCCTGTTGAGTCAGAATTAGTTCAATTAGATGATCCAGCAGAATCTTATGTAAGAGATCTGCTTGTTGCCTCTGGTTTGTACTTTGGTTCATGGGATAAGTCTCTATTAAGAGGGGACACATTTGCAAAGCCTATTGGCAACTCAGTTTTTGAAGAAGTGGAAGAGTCTCATGACAATTTGATCAAGGAGGATGAAAGATCCACAAAGGATCAGCAGAACAAAAACAAGTTAGAGCACAAGGTTTTGCTTGATTTGTTAAATGAGGCACTTTCCATAGTTCTTGGACCACCTTTGACTTTGTCTAGATTCCGAAGGAAACTAAGCAATTCCTCCTTGCAGCCTCCACCATGTGGAAACGAACTACTGAAGTTGACATGGGACATTGTCAGTGTTTCTTTAAATCCTTCATCTAACGCATCTCTTTATTCACTTGATAGTTTGGTGGCACAAGATCTAGGATCTATCTCCTGGTCTGGACTAACAAATGATCATATTGATACATTGGAAAGAGAGATGGCATGTCTAATCACTGATGATTTGGTTGAAGAATTCACAAATGATATGGTCTTTTAA 2577 0.395 MGGLLHMFEFNQGRMAKKVHAQRSNNGDLESSGNGMELQVETSQVHCAEGELPYSCQVEDGWSKKNSYSNVVSVKKLNKEDLSKQSGTTRNNAASLVARLMGIDTMPLPLETNSVVPLDESKHKNMERKFSKKGMNRRGSVGRGSSNFNSSSQMEFDSFYQDIDGDHDDGCRQNFGKPRPREHPQEEELQKFKKEFEAYQESRFKECSKDVEIGSGSRRIPSQENLRKEKMLQIASSKTDSHTFKTKLPNGNMMEPIPTTKKDFFPSRSKTLSRDFEESLMMKSGSRLDICASSAQIVILKPGSDRICNCNHEENCINLSGTLHGRKGLEDFLEEVRERLECELQGIRASGIETPYNEKLSDAKEVRESVTRDAEPNLLRSESTRSYKSKMQFNGPSSPELFNIDTRRFLSERLRNIVNGELHLDIPEVACYNDRVRLKQDTTKCANDKSQWRILKEKKELQTGSYRHKLDDNVLFHKDLSPRNLERSLSAPASGTSFGRLLLEDRHILTGALIQRKLEAVEAMPVDVKKKKKDGFNIKEKLSNFTLGLRGKLFGKRVQSIVESHGSEYGPILRDIRSGPTVFMKYGERHENSTEVPPSPASMCSCVHEKNWRQTGYSSLTSTPDVSSLDDIFIPKVFRDISSGLNELKRQLSQLDSDGSEDFTTKQEPVESELVQLDDPAESYVRDLLVASGLYFGSWDKSLLRGDTFAKPIGNSVFEEVEESHDNLIKEDERSTKDQQNKNKLEHKVLLDLLNEALSIVLGPPLTLSRFRRKLSNSSLQPPPCGNELLKLTWDIVSVSLNPSSNASLYSLDSLVAQDLGSISWSGLTNDHIDTLEREMACLITDDLVEEFTNDMVF 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01083 858 MobiDBLite consensus disorder prediction 19 42 - -
Gma16g01083 858 Pfam Domain of unknown function (DUF4378) 683 851 IPR025486 -
Gma16g01083 858 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 857 - -
Gma16g01083 858 MobiDBLite consensus disorder prediction 236 261 - -
Gma16g01083 858 MobiDBLite consensus disorder prediction 124 150 - -
Gma16g01083 858 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 857 - -
Gma16g01083 858 MobiDBLite consensus disorder prediction 25 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01083 Gma-Chr16 27360350 27364112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01083 74 856 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 37.439 5.19e-130 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01083 - - gmx:100810825 1680.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01083 16 27360350 27364112 Gma16g01083 16 27360350 27364112 ECH
Gma01g01623 01 51927306 51931915 Gma16g01083 16 27360350 27364112 PCT
Gma11g00788 11 6574318 6580222 Gma16g01083 16 27360350 27364112 PCT
Gma16g01083 16 27360350 27364112 Gma01g01623 01 51927306 51931915 PCT
Gma16g01083 16 27360350 27364112 Gma11g00788 11 6574318 6580222 PCT