Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01080 ATGTCATCGTCATCATCGAGCAATGCCTACGACGTGCCATGGGTAGAAAACTATCGTTCCAGCAATGTCATCAACATCGTCGACAATGAGGACACCGTCTCTAGGCTCCAAGTCATCGCTCGCGATGACAACATGCCCAATCTCATTTTATTCGGTCCTCCCGGAACCGGCAAAACCACTAGCATTATTGCTCTTGCACACGAGCTTCTCAGAGGACCAAATTACAAGGAAGCTGTTCTTGAACTAAACGCTTCGAATGATAGAGGAATTGATGTTGTGAGGAACAAGATCAAGATGTTTGCTCAGAAGAAAGTCATGCTGAGCTCGAGGAGGCACAAGATAGTGATACTGGCTGAAGTTGATAGGTGA 369 0.4634 MSSSSSSNAYDVPWVENYRSSNVINIVDNEDTVSRLQVIARDDNMPNLILFGPPGTGKTTSIIALAHELLRGPNYKEAVLELNASNDRGIDVVRNKIKMFAQKKVMLSSRRHKIVILAEVDR 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01080 122 Pfam ATPase family associated with various cellular activities (AAA) 48 122 IPR003959 GO:0005524|GO:0016887
Gma16g01080 122 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 5 121 - -
Gma16g01080 122 Gene3D - 5 122 IPR027417 -
Gma16g01080 122 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 122 IPR027417 -
Gma16g01080 122 CDD AAA 27 122 - -
Gma16g01080 122 PANTHER REPLICATION FACTOR C SUBUNIT 2 5 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01080 Gma-Chr16 27290411 27290941 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01080 7 121 Core DNA Replication Machinery Family AT1G63160 78.261 8.20e-59 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01080 K10755 - gmx:102662052 239.965