Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01073 ATGGTAACCATTCGTGCATATGAAATTAGTAAAATTATCTGTGAACGCATTGAGCAATATAATACTAAAGTAAAAATTGCAAATACAGGTATCGCACTTCAAGTAGACGACAGTATTGCTTGTATTTATGGTCTTGATGAAGTAATGGTGGGTGAATTAGTGGAATTTGAAGAGGAGGGAAGTTCAGTAAAAGCAACAAGAAGAATTGCTCACATACCTGTAAGTGAGGCTTATTTGGGTCTTGTTATAAATGCCTTGGCTAAACCAATTGATGGTCGAGGAGAAATTTCAGCTTCAGAATCTCAATTAATTGAATCTCCTGCTCCCGGTATTATTTCGAGACGTTCCATATATGAGCCTCTCCAAACAGGACTTAATCTTATTGATTCGATGATCCCCATAGGACGTGGCCAACGAGAACTAATTATTGGAGATAGACAAACAGCTATTGGTCAAAAAGCATCTTTTGTGGCTCAAGTGACAGGAGTAGCTCTGGTTGAATATTTTATGTACCATGAACGTCACACTTTAATCATTTATGACGATCTCTCCAAACAAGCACAGGCTTATCGCCAAATGTCTCTTCTATTACGAAGACCACCTGGTCACGAAGCTTATCCAAGGGATTTTTTTATTTACATTCACTTAGGCGAAGGAAGTATGACTACTTTACCAATAGTTGAAACTCAATCGGGAGATGTTTCAGCTTATACTCCTACTAATGTAATTTCCATTACAGATGGCCAAATATTCTTATATGCAGATCTATTCAATGCTAGAATCAGACCCGCTATTAATGTAGGTATTTCTGTTTCCAGAGTTGGATCGGTGGCTCAAATTAAAGCCATGAAAAAAGTAGCTGGTAAATTAAAATTGGAATTAGCACAATTCGCAGAATTAGAAGCTTTTGCCCAATCCGCTTCTGATCTCGATAAAGATACTCAAAATCAATTAGCAAAAG 961 0.3725 MVTIRAYEISKIICERIEQYNTKVKIANTGIALQVDDSIACIYGLDEVMVGELVEFEEEGSSVKATRRIAHIPVSEAYLGLVINALAKPIDGRGEISASESQLIESPAPGIISRRSIYEPLQTGLNLIDSMIPIGRGQRELIIGDRQTAIGQKASFVAQVTGVALVEYFMYHERHTLIIYDDLSKQAQAYRQMSLLLRRPPGHEAYPRDFFIYIHLGEGSMTTLPIVETQSGDVSAYTPTNVISITDGQIFLYADLFNARIRPAINVGISVSRVGSVAQIKAMKKVAGKLKLELAQFAELEAFAQSASDLDKDTQNQLAK 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01073 320 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 156 272 IPR000194 GO:0005524
Gma16g01073 320 ProSitePatterns ATP synthase alpha and beta subunits signature. 263 272 IPR020003 GO:0005524
Gma16g01073 320 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 280 319 - -
Gma16g01073 320 PANTHER ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTIC 1 58 - -
Gma16g01073 320 PANTHER ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTIC 58 149 - -
Gma16g01073 320 PANTHER ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTIC 156 320 - -
Gma16g01073 320 Gene3D - 3 153 - -
Gma16g01073 320 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 1 58 - -
Gma16g01073 320 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 278 IPR027417 -
Gma16g01073 320 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 58 149 - -
Gma16g01073 320 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 156 320 - -
Gma16g01073 320 Gene3D - 154 320 - -
Gma16g01073 320 Pfam ATP synthase alpha/beta chain, C terminal domain 279 320 IPR000793 GO:0015986
Gma16g01073 320 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 11 59 IPR036121 GO:0046034|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01073 Gma-Chr16 27084100 27085339 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01073 167 285 Primary Pumps ATPases(2) AT4G38510 33.846 2.27e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01073 K02111 - gmx:121173224 464.922