Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01069 ATGACCCTTCAAGCTGATTCAGCAGCACCACCACCACCACTACCACCACCGGATTCAGCAGCCACCAACGGCATCTCACCCACAGCAGAGGAAACCTCACAACCGCCGCGTCCAACCCCGCCGCCAGAACTTCGCGTCCCAATATGGTGGCCGGAGGACGGCACCCTCAGCATGGATTGGGTGGAGAATCTGATGCGGTGCTTCGATTGGTGCTCTCGGAACGTCCCTCCGTCGGAGCTCCCTTCGGTTCTCCCCGTCGAAGTCTTCGACTCGCTCATCCTCGTCGCCTCCAAGATGCTCCACAAGGAGCCCAATTGTGTCCCCGTAGACCCCTTCCGCCCTACCCTCGATGATAATAGCACTCCCTCCGACTCCGCTGCCGCTGCCTCTGTTGTCGTCGTCGGCGATGTTCACGGCCAACTGCATGATCTTCTCTTCCTCCTCCGAGATGCCGGGTTCCCCTCGCGGGATCGAATCTTTGTTTTCAACGGGGATTACGTGGATCGGGGAGCGTGGGGGCTCGAAACCTTCTTGCTCTTGTTGGCTTGGAAGGTATTCATGCCACATAACATATATTTGCTACGAGGGAATCACGAATCAAAATACTGTACATCGGTTTATGGTTTTGAGAAAGAAGTAATGGTTAAGTATGGTGATAAAGGTAAGCATGTGTACCGGAAATGTTTGGGGTGCTTTGAAGGTCTTCCTTTGGCTTCTATTATAGCAGGGTGTGTATACACAGCTCATGGAGGACTTTTCCGCAGTGTAACTGTGATGCCATCAAAGAGGTTAAAAGGGAAGAAGAACCGTAAGATTAATGTTAATCATGAGAGCAAAATTCTATCTCTTGGTTCCTTGGAAGAATTGTGTAAGGCTCGACGATCAGTTTTGGATCCTCCTTGGGAAGGCCCAAACTTGATTCCTGGTGATGTTTTGTGGTCTGATCCATCCAAAAATCCTGGTCTTGCTCCAAACAAAGAAAGAGGCATTGGCTTGATGTGGGGTCCCGATTGTACTGAAGAATTTTTGAAGAAGTACCAACTAAAGTTGATCATCAGGTCACATGAAGGTCCTGATGCTAGGGAAAAAAGGGATGGTTTTGAGGGAATGGATGAAGGTTACACTATTGATCATGTTGTAGATTCTGGAAAGCTGGTCACTGTGTTTAGTGCTCCAGATTACCCACAGTTTCAGGCAACACAGGTGAGGTATAACAACAAAGGCGCCTATGTTATCCTTGAACCCCCGAATTTTGACAATCCTATATTTCATGGATTTTCAGCAGTTACTCCAAGGCCGAAGGCGAATCCCTATTACGATTATGAAGAGGTGATAGACTCCGATGAAGAATTGGATTTGGCCTCCATGGTAACTTCCTGA 1380 0.4891 MTLQADSAAPPPPLPPPDSAATNGISPTAEETSQPPRPTPPPELRVPIWWPEDGTLSMDWVENLMRCFDWCSRNVPPSELPSVLPVEVFDSLILVASKMLHKEPNCVPVDPFRPTLDDNSTPSDSAAAASVVVVGDVHGQLHDLLFLLRDAGFPSRDRIFVFNGDYVDRGAWGLETFLLLLAWKVFMPHNIYLLRGNHESKYCTSVYGFEKEVMVKYGDKGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSVTVMPSKRLKGKKNRKINVNHESKILSLGSLEELCKARRSVLDPPWEGPNLIPGDVLWSDPSKNPGLAPNKERGIGLMWGPDCTEEFLKKYQLKLIIRSHEGPDAREKRDGFEGMDEGYTIDHVVDSGKLVTVFSAPDYPQFQATQVRYNNKGAYVILEPPNFDNPIFHGFSAVTPRPKANPYYDYEEVIDSDEELDLASMVTS 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01069 459 CDD MPP_PP7 50 440 IPR041754 -
Gma16g01069 459 MobiDBLite consensus disorder prediction 33 47 - -
Gma16g01069 459 MobiDBLite consensus disorder prediction 1 47 - -
Gma16g01069 459 ProSitePatterns Serine/threonine specific protein phosphatases signature. 194 199 IPR006186 GO:0016787
Gma16g01069 459 PRINTS Serine/threonine phosphatase family signature 130 157 IPR006186 GO:0016787
Gma16g01069 459 PRINTS Serine/threonine phosphatase family signature 160 187 IPR006186 GO:0016787
Gma16g01069 459 PRINTS Serine/threonine phosphatase family signature 193 217 IPR006186 GO:0016787
Gma16g01069 459 PRINTS Serine/threonine phosphatase family signature 230 256 IPR006186 GO:0016787
Gma16g01069 459 PRINTS Serine/threonine phosphatase family signature 290 317 IPR006186 GO:0016787
Gma16g01069 459 PRINTS Serine/threonine phosphatase family signature 384 400 IPR006186 GO:0016787
Gma16g01069 459 SUPERFAMILY Metallo-dependent phosphatases 80 434 IPR029052 -
Gma16g01069 459 SMART pp2a_7 84 433 IPR006186 GO:0016787
Gma16g01069 459 Pfam Calcineurin-like phosphoesterase 130 358 IPR004843 GO:0016787
Gma16g01069 459 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 31 456 - -
Gma16g01069 459 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 31 456 - -
Gma16g01069 459 Gene3D - 79 448 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01069 Gma-Chr16 26918120 26928886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01069 39 350 Calmodulin-binding Proteins AT5G63870 68.051 9.82e-155 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01069 K04460 - gmx:100802851 901.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01069 16 26918120 26928886 Gma16g01069 16 26918120 26928886 ECH