Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01040 ATGAAGTTTCCTCTTCTTCTCATTTCCTTTCTTCTTGCCTCCCTAATCACCTTCTACTGCTTCATCCCAACCTCAGGAACGCCCCATTCAAATGAAGAACGCGACATCCACAGTGCACTTCACCATCGACCCGCTTCGCGATCCCTTCTCTCTCTTCCTCCTAAGGCTGCAACTACGGCACTGATTGTGACCCTAGATGGGACTATGCACTTGGTGGACCAATTGGAGAGTGGTTCCATGAGAGTCATATGGTCGTTCTCGACAGGATCACCAATCTATCAATCACATCGAGCACCAACCAAAAAGGATAATGGTAAAGAAAATGCATCTGCAGCACTAACGAGTGGGTTCATGGAATGCGGGGAAGGGAATGACTGGTCATTGTATATGCACGACAAGCACTTTGGTAAAATGAGAATCTCAGAATCTATTGCAGAATATGTAGCTCGTACACCTACCTTTTCAGATGATGGAGCAGTAACACTTGGATCCAAAAGAAGCACTTTGTTTGAAGTTGATGCTAAAACTGGATCAATCATTAAAATCCATGCGATGTCTGATATTGATAATGCTTCTGCACCTTGGAGTGATGGCAACCAAGGTGTTACAAATATCCTCAACGTAAACGATAAGGATCTTGCTGATCCTATGAAGCTTAATTCACCACAGCCGCTGCTTAAGATTTTTAGGACAGATTATTCTCTTAAATCTGTTGGTCCTAGCTCAGGAATAGTTTTGTGGACTATGGCAGTAGCTGAATTAGAGGCTGTCTTATTATGCCAACATACCTCTTTTGATCTAGAGGATGAGTATGCTTCTGACAGTAGCCTCAACTTTAGGATGCCATACCCATGTCAAGAGATAAACCAAGTCATTCGCCTGAAAAAGAATTTTCAGTTTGAACCTTCACTAACTGAAAGATTACTTGTGGATTATCATGAAAATGATATGCTCTCAATTCCTAACTCAAATCTAATACTTCCTTCACAGCCAAATATTGATAGATTATTCAATGGTCATGATGATAATATAATGCTCCCTCAACAGCCTCTTGTGGAGATTACAACACCAGGGGAAGTTTATCTGAACAGGACAAGTGAATGGCCAACTCCATTACCTCTTATATTGTTTACGGTCTTTCTTGTGGCCTTTTCAGTCATCTATCCTCTAGTGATTAAGAATCAAGATGTAATGAAGGACCAAAACAGTGAGTCTGAATTAAAAAGCTCGCCTGCTAAGAAAAAGAAAACACGAAAATCAGGGAAGAAAAATGACACTATCGATAAAAGGGAAAAGCACCTGTCTCCAGAGAATAAGGATGTTCTGACACAAAAGGGTAATTATAGAGAAGTATGGCAGCACTTCAACCAAGTTGATGAAAGTGTTGATGGACGAAGGATTGGTAAATTATTTGTTTCAAATAAAGTGATTGCTAAGGGCAGCAACGGTACCATTGTCCTTGAGGGAATATATGAAGGCCGAGCAGTTGCTGTTAAACGTCTCGTTAAGGCTCATCATGATGTAGCTTATAAAGAAATCCAAAATCTTATTGTGTCTGATCAGCATCCAAATATTGTCCGATGGCATGGGGTGGAGTATGATAGCGATTTTGTTTACCTTGCTTTGGAACGTTGTACATGCAATTTAGATGATTTGATTCAAATTTATTCAGATATATCAGAAAACTCTGTGCTTATGAAGGACCAAGGTTTCAGATGTTTGATAAAGTCCCAAATGGAGATGGAGAAGTATAATACACAATGTCTTTGGAAGGAAAACCGCTATCCATCGCCTCTATTACTAAAACTAATGAGGGACATTGTGTCTGGGGTTGTTCATTTGCATGAATTGGGAATGATACATCGGGATTTGAAACCACAAAATGTTCTAATAATCAAGGAAAAATCCTTATGTGCAAAGCTTTCTGATATGGGGATTAGCAAATGTCTTTTGGAAAATATGTCTTCTTTGGGTAATAATGCTACTGGTGGTGGCAGTTCAGGTTGGCAAGCACCAGAGCAACTTGTTGAAGGACGTCAAACACGGGCAGTAGATATATTTAGTTTAGGTTGTGTCCTCTTTTTCTGTGTTACTGGGGGAAAACATCCATTTGGAGAACGTATTGAACGGGATATCAATATTTTGAAAAATAAAATGGATCTTTTCCTAGTGGAGTTCATTCCTGAAGCCAAAGATCTTATTAGTCGTCTATTAAACCCTAACCCTGATGTAAGGCCAAAGGCAACTGAGGTATTGTACCATCCTTTTTTCTGGAGTTCTGAGATGAGACTTTCCTTTTTACGTGACACCAGTGACAGGGTGGAACTGGAGAATAGAGAGACTAATTCTGATCTTTTGGTGACATTAGAAAGCATTGCTACAGTGGCCTTGGGTGGAAAATGGGATGAAAGGATGGAACCAGCTTTCATTGCTAACATCGGTTATTACCGGCGATATAATTTTAACAGTGTTCGAGACTTGTTGCGAGTTATGAGAAACAAACTAAATCATTATAGAGAAATGCCTCGAGAAATCCAGGAACTTGTAGGACCTGTTCCCGAAGGATTCTTCAATTACTTTGCAAGTCGATACCCAAGACTCTTGATTGAAGTGTATAAAGTTATACTCCAATACTGCAAGGAGGAAGAATGTTTCCTAAGATATTTTAAAAATGTTGATTAG 2682 0.3967 MKFPLLLISFLLASLITFYCFIPTSGTPHSNEERDIHSALHHRPASRSLLSLPPKAATTALIVTLDGTMHLVDQLESGSMRVIWSFSTGSPIYQSHRAPTKKDNGKENASAALTSGFMECGEGNDWSLYMHDKHFGKMRISESIAEYVARTPTFSDDGAVTLGSKRSTLFEVDAKTGSIIKIHAMSDIDNASAPWSDGNQGVTNILNVNDKDLADPMKLNSPQPLLKIFRTDYSLKSVGPSSGIVLWTMAVAELEAVLLCQHTSFDLEDEYASDSSLNFRMPYPCQEINQVIRLKKNFQFEPSLTERLLVDYHENDMLSIPNSNLILPSQPNIDRLFNGHDDNIMLPQQPLVEITTPGEVYLNRTSEWPTPLPLILFTVFLVAFSVIYPLVIKNQDVMKDQNSESELKSSPAKKKKTRKSGKKNDTIDKREKHLSPENKDVLTQKGNYREVWQHFNQVDESVDGRRIGKLFVSNKVIAKGSNGTIVLEGIYEGRAVAVKRLVKAHHDVAYKEIQNLIVSDQHPNIVRWHGVEYDSDFVYLALERCTCNLDDLIQIYSDISENSVLMKDQGFRCLIKSQMEMEKYNTQCLWKENRYPSPLLLKLMRDIVSGVVHLHELGMIHRDLKPQNVLIIKEKSLCAKLSDMGISKCLLENMSSLGNNATGGGSSGWQAPEQLVEGRQTRAVDIFSLGCVLFFCVTGGKHPFGERIERDINILKNKMDLFLVEFIPEAKDLISRLLNPNPDVRPKATEVLYHPFFWSSEMRLSFLRDTSDRVELENRETNSDLLVTLESIATVALGGKWDERMEPAFIANIGYYRRYNFNSVRDLLRVMRNKLNHYREMPREIQELVGPVPEGFFNYFASRYPRLLIEVYKVILQYCKEEECFLRYFKNVD 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01040 893 Gene3D Transferase(Phosphotransferase) domain 1 575 759 - -
Gma16g01040 893 MobiDBLite consensus disorder prediction 421 439 - -
Gma16g01040 893 SUPERFAMILY Protein kinase-like (PK-like) 464 776 IPR011009 -
Gma16g01040 893 SMART serkin_6 471 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01040 893 ProSiteProfiles KEN domain profile. 760 891 IPR010513 GO:0004540|GO:0006397
Gma16g01040 893 Gene3D - 39 261 IPR015943 GO:0005515
Gma16g01040 893 MobiDBLite consensus disorder prediction 399 440 - -
Gma16g01040 893 ProSiteProfiles Protein kinase domain profile. 471 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01040 893 Gene3D Phosphorylase Kinase; domain 1 457 543 - -
Gma16g01040 893 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 7 889 - -
Gma16g01040 893 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Gma16g01040 893 PANTHER IRE1-RELATED 7 889 IPR045133 GO:0004521|GO:0004674|GO:0030968
Gma16g01040 893 CDD RNase_Ire1 761 889 - -
Gma16g01040 893 Pfam Protein kinase domain 473 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01040 893 Gene3D KEN domain 760 893 IPR038357 -
Gma16g01040 893 SMART PGNneu 822 876 - -
Gma16g01040 893 Pfam Ribonuclease 2-5A 763 889 IPR010513 GO:0004540|GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01040 Gma-Chr16 26193003 26203393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01040 497 756 MAP Kinase Kinase Kinase AT3G06030 28.030 2.28e-21 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Gma16g01040 Pkinase 1.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01040 K08852 - gmx:100785904 1769.21