Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01035 ATGTCGTGTTCTTCTTCATCTGGGTCTGAAGAGGAGGATGAGGGGTTCGACTCTTACCGGAAAGGAGGGTACCACGCCGTCAGAGTCGCCGATCAGTTCGCCGGCGGCAGGTACATAGCGCAGAGGAAGCTCGGTTGGGGTCAGTTTTCAACAGTTTGGCTTGCCTATGATACTACTACATCTGCATATGTTGCTCTCAAGATCCAGAAAAGTGCTGCCCAGTTTGTTCAGGCTGCCCTTCATGAAATTGATGTTCTTTCATCCCTTGCTGATGGTGTCGATATGGATTCAAAATGTGTTGTCCATTTGATTGATCACTTTAAGCACACAGGTCCTAATGGTCAGCACCTTTGCATGGTGCTTGAGTTTCTTGGGGATAGTTTGCTTCGTCTAATCAAATATAACCGGTATAAAGGCCTTCCTTTGGATAAAGTTAGGGAGATTTGCAAGTGCATTTTGATCGGTTTGGATTATTTACATAGAGAACATGGCATTATCCACTCAGACCTAAAACCAGAAAATGTTCTTCTGGTTTCTACCATTGATCCTGCCAAAGACCCTGTTAGATCTGGACTCACCCCAATATTAGAGAGGCCTGAGGGAAACATAAATGGTGGTGGAGTTACTAGTCTTATTGAGAAAAAGTTGAAAAGAAGAGCTAGGAGGGCAGTTGCAAAAATATCTGGGAGAAGTTCTCCAATAGGAGGAATTGAAGCTCCAAAGTCTGACAGAAATCTTGATGGGATTGATGTGAGATGCAAGGTGGTAGATTTTGGAAATGCTTGTTGGGCTGATAAGCAGTTTGCAGAAGAAATTCAAACAAGACAGTACAGAGCTCCTGAAGTAATACTGCAGGCCGGTTATTCCTTTGCTGTTGACATGTGGTCTTTTGCTTGCATTGCTTTTGAGCTTGCCACTGGTGATATGTTGTTTACTCCCAAGGTTGGACAGGGTTTTAGTGAGGATGAGGATCACCTTGCCCTGATGATGGAACTCCTTGGAAAGATGCCCCGGAAGGTTGCTACTTCTGGAGCAAAATCCAAGGACTTCTTTGACAGACATGGGGATCTCAAAAGGATTCGAAGACTTAAGTTTTGGCCGCTAAGCAAATTGTTGATTGATAGATATAAATTTTCAGAGCGCGATGCCTGTGAGTTTTCAGAGTTTCTTTTACCACTTCTTGATTTTGCACCCGAGAAGCGGCCAACAGCACAGCAGTGCCTGCAACTCCCATGGCTCCAGGGCATAGAGTCTACACCAAATGAAATGAGAAATGAATCTAGTGTGGAAAAGGTGGGTGTTGGGATGAGCAACCTTCAAATCAAG 1326 0.4442 MSCSSSSGSEEEDEGFDSYRKGGYHAVRVADQFAGGRYIAQRKLGWGQFSTVWLAYDTTTSAYVALKIQKSAAQFVQAALHEIDVLSSLADGVDMDSKCVVHLIDHFKHTGPNGQHLCMVLEFLGDSLLRLIKYNRYKGLPLDKVREICKCILIGLDYLHREHGIIHSDLKPENVLLVSTIDPAKDPVRSGLTPILERPEGNINGGGVTSLIEKKLKRRARRAVAKISGRSSPIGGIEAPKSDRNLDGIDVRCKVVDFGNACWADKQFAEEIQTRQYRAPEVILQAGYSFAVDMWSFACIAFELATGDMLFTPKVGQGFSEDEDHLALMMELLGKMPRKVATSGAKSKDFFDRHGDLKRIRRLKFWPLSKLLIDRYKFSERDACEFSEFLLPLLDFAPEKRPTAQQCLQLPWLQGIESTPNEMRNESSVEKVGVGMSNLQIK 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01035 442 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 5 442 - -
Gma16g01035 442 Gene3D Transferase(Phosphotransferase) domain 1 92 413 - -
Gma16g01035 442 SMART serkin_6 38 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01035 442 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Gma16g01035 442 SUPERFAMILY Protein kinase-like (PK-like) 32 422 IPR011009 -
Gma16g01035 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Gma16g01035 442 CDD STKc_SRPK 27 413 - -
Gma16g01035 442 Pfam Protein kinase domain 39 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01035 442 Pfam Protein kinase domain 252 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01035 442 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 5 442 - -
Gma16g01035 442 ProSiteProfiles Protein kinase domain profile. 38 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01035 442 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01035 Gma-Chr16 26099621 26103535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01035 4 428 EF-hand Containing Proteins AT5G22840 50.731 1.10e-168 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Gma16g01035 Pkinase 4.8e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01035 K08832 - gmx:100811724 873.233