Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01030 ATGATCACTGATGTGCCCCCATCTATGACTCAAAACGGTAGGTCAAGCAGATATTCCTTTGGCTCAAGCAATGGCAATGGTGATACCCCTGCACAAAATGGCTCTGCTGTTATCAATGTTGATGATTATGATAGTGATAGCTCCAATTTTGCACCATCCACGCCATCAACTATGTCAATGGCTGTTCCAGCAGAACTAGGTGGAGCTGTACCCTTGATCAACAGATTCCAGGTGGATGGATTTTTAAAATTAATGCAGAAACAAATTCAATCTGCTGGGAAACATGGATTTTTTTCTAAAAGATCTGTAGGTCCCCAAGTTCGAGAAAAAGTTACATTTGAGGACATGTTGAGTTTTCAAAAGGATCCAATTCCAACATCATTGCTCAAGTTAAATGTTGATTTTGTAAGTAGGGCAACAAAATTATTCCAAATAATTTTGAAATATATGGGAATTGATCCATCTGATCGTGTAACTCCAATAAGCTTAGATGAACGAGTTGAGCTTGTAGGGAAACTGTACAAGCAAAGTTTGAAACGACCAGAACTCCGAGATGAACTTTTTGTTCAGATATCAAAGCAAACAAGAAATAACCCTGAGAGGCAATACTTGATTAAAGCATGGGAGCTCATGTATTTGTGTGCATCCTCAATGTCTCCTAGTAAAGATATTAGCAGTTATCTATCAGAATACATTCATAACATAGCAAATGGTGTGGCTACTGATTCTGAGATTCAAGTCCTTGCATTAAATACATTAAATGCTTTGAAACATTCTGTCAAGGCTGGTCCCAGACATATAATTCCTGGGCGTGAGGAGATTGAAGCTCTGTTGACTGGGAGAAAGCTTACAACTATAGTGTTCTTCCTAGATGAAACTTTTGAAGAAATTACGTATGACATGTCAACCACAGTTGCCAATGCTGTTGAGGAACTTGCAGGGCTCATTAAACTGTCAACTTACTCCAGCTTTAGTCTATTTGAATGTCGTAAAGTTGTTACTGGCTCCAAAGCACCTGATCTTGGGAATGAGGAGTACATTGGGTTAGATGCAAACAAATATATTGGGGATCTCCTGGCAGAATTTAAAGCTGCAAAGGATCGGAGTAAAGGAGAAATCTTGCACTGTAAACTGATATTCAAGAAAAAGTTATTTCGTGAGTCAGATGAAGCTGTGACAGAGCCTATGTTTGTGCAATTATCTTATGTACAGATGCAACATGATTATATTTTGGGAAATTACCCTGTTGGAAGGGATGATGCTGCTCAGCTTTCTGCCTTACAAATCTTAGCTGAGATTGGATTTCTTAGCACACCAGAATCATGCATTGACTGGAATTCACTTCTGGAGCGTTTCCTGCCCAGACAAATTTCAATGACACGAGCAAAACGGGAATGGGAGTATGACATTCTTTCTCGTTATCGTTCATTGGAGAATCTGACAAAAGATGATGCGCGACAACAATTTCTGCGTATATTGAGAGCACTTCCTTATGGAAATTCTGTTTTCTTCAATGTTCGCAAGATTGATGATCCTATTGGACTCTTACCTGGCCGGATAATTTTGGGAATTAATAAAAGAGGGATTCATTTTTTCCGTCCAGTTCCTAAGGAATATTTGCACTCAGCTGAGTTGAGAGACATAATGCAATTTGGAAGCAGCAATACTGCAGTCTTTTTTAAAATGCGAGTTGCAGGTGTTCTCCACATATTCCAGTTTGAAACCAAGCAGGGAGAAGAAATTTGTGTAGCTCTTCAGACACACATAAATGATGTAATGCTGCGTCGCTATTCGAAAGCAAGATCAGCTGCTGGTGGTGGTAGTGGTTCTCTGAATGGAGACATTTCTAATAATTCTAAAACTCCTAATATGGAATTATATGAGAAGCGTGTTCAAGAATTGTCAAAACATATTGAAGAATCTAAAAAAAATGCTGATCAATTGCTTGAAGAATTACGTGTGAAGCAAAAACAAGAAGAGAAAATGCAAGAAGAATTGGATGACTTGAAAGAATCCTTAAAAGCCAATAAACAAAATTTGGATGCCGTTACAAGTGACCGTGATAGTCTTGTATCATTATGCAATGAAAAAGATAAGGAACTACAGGCTGCTATTCTAGACAAAAGGAATATGGAATCTAGGATGGCCAAGTTAAATAATGCGGTGATAGAGAACACTGCCAAAAAGGATCTTGCTAATGCTGGAAATAGACAAGTGACTCAAAAGCTTGAAGATGAGCTAAAAGTTTGTAAATATGAGCTGCTATCAGCCAACGAAACTATCGAAAGCTTGAAGAGTGAAAAATTGATTTTGGAACAGAAGTTATCTGCACTTGAAAAGAGGAATGCTGGAGAGATTAGTTCCCTTAAGTGGAAACTTGAGCAAGAACGCAAAGTTGTGAAGTCTGAAGCGTACGAGCTTGAAAGAAGGCTAGAAGGGTGTAGGCAAGAATTATTGACTGCTAAGGCTATCATTTCAGTCAAGGACTCTGAATTTGATGCATTGCAGAATAATTTGAAGGAGCTAGAAGAATTGAGAGAAATGAAAGAGGATATCGATAGAAAGAATGAACAGACAGCTGCCATACTGAAAATACAAGGGGCTCAATTAGCTGAAATGGAATCACTTTATAAGGAAGAACAGGTTTTAAGGAAGCGCTATTTTAATGTAATAGAAGACATGAAGGGCAAGATCAGAGTTTACTGTCGACTAAGACCTCTTAGTGAAAAAGAGATTGTTGAGAAAGAAAGAGAAGTTCTTACTGCAGTTGATGAATTTACTGTTGAATACCCATGGAAAGATGAAAAACTGAAGCAGTACATATATGACCGAGTTTTTGATGCTAATGCAACTCAAGAAAGCGTATTTGAGGATACAAAGTATTTGGTGCAATCTGCTGTAGATGGTTATAATGTTTGCATATTTGCTTATGGTCAAACTGGATCTGGAAAGACATTTACAATCTATGGATCGGACATCAACCCTGGGCTTACTCCTCGTGCAATTGCAGAACTTTTCAGAATTTTAAGAAGAGATAATAACAAGTATTCTTTTTCCTTGAAGGCATACATGGTGGAGTTGTATCAGGATACCCTTATAGATCTGTTGTTACCAAAGAATGGAAAGCCTTTAAAATTGGATATCAAGAAGGATTCAACGGGAATGGTAGTTGTGGAAAATGTGACAGTTATGTCTATTTCTACAATTGAAGAATTGAATAGTATAATACAAAGAGGATCTGAACGGCGACATATATCAGGAACCCAAATGAATGATGAAAGTTCAAGATCTCATCTCATTCTATCAATTGTAATTGAAAGTACCAACCTTCAAAGTCAGTCAGTTGCAAAAGGAAAGCTAAGTTTTGTGGATCTTGCTGGTTCAGAAAGAGTGAAAAAGTCAGGTTCTACCGGGAGTCAGCTTAAGGAAGCTCAGAGCATTAACAAGTCATTATCAGCACTTGGAGATGTTATTAGCTCTTTGTCTTCTGGTGGTCAACACACACCATACAGGAATCACAAATTAACCATGTTAATGAGTGATTCACTTGGTGGTAATGCCAAAACTCTCATGTTTGTGAATGTTGCTCCCACAGAATCAAATTTGGATGAGACAAATAACTCTCTCATGTATGCCTCACGAGTGAGATCCATTGTGAATGACCCCAACAAAAATGTTTCCTCAAAAGAGGTAGCACGGCTGAAGAAGTTGGTTGCATATTGGAAACAACAAGCTGGTAGAACACTTGAGTATGATGATTTAGAAGAAATTCAAGATGAAAGACCAACTAAAGAGAATGGTAATGGCAATAGGTAA 3816 0.38 MITDVPPSMTQNGRSSRYSFGSSNGNGDTPAQNGSAVINVDDYDSDSSNFAPSTPSTMSMAVPAELGGAVPLINRFQVDGFLKLMQKQIQSAGKHGFFSKRSVGPQVREKVTFEDMLSFQKDPIPTSLLKLNVDFVSRATKLFQIILKYMGIDPSDRVTPISLDERVELVGKLYKQSLKRPELRDELFVQISKQTRNNPERQYLIKAWELMYLCASSMSPSKDISSYLSEYIHNIANGVATDSEIQVLALNTLNALKHSVKAGPRHIIPGREEIEALLTGRKLTTIVFFLDETFEEITYDMSTTVANAVEELAGLIKLSTYSSFSLFECRKVVTGSKAPDLGNEEYIGLDANKYIGDLLAEFKAAKDRSKGEILHCKLIFKKKLFRESDEAVTEPMFVQLSYVQMQHDYILGNYPVGRDDAAQLSALQILAEIGFLSTPESCIDWNSLLERFLPRQISMTRAKREWEYDILSRYRSLENLTKDDARQQFLRILRALPYGNSVFFNVRKIDDPIGLLPGRIILGINKRGIHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSAAGGGSGSLNGDISNNSKTPNMELYEKRVQELSKHIEESKKNADQLLEELRVKQKQEEKMQEELDDLKESLKANKQNLDAVTSDRDSLVSLCNEKDKELQAAILDKRNMESRMAKLNNAVIENTAKKDLANAGNRQVTQKLEDELKVCKYELLSANETIESLKSEKLILEQKLSALEKRNAGEISSLKWKLEQERKVVKSEAYELERRLEGCRQELLTAKAIISVKDSEFDALQNNLKELEELREMKEDIDRKNEQTAAILKIQGAQLAEMESLYKEEQVLRKRYFNVIEDMKGKIRVYCRLRPLSEKEIVEKEREVLTAVDEFTVEYPWKDEKLKQYIYDRVFDANATQESVFEDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSDINPGLTPRAIAELFRILRRDNNKYSFSLKAYMVELYQDTLIDLLLPKNGKPLKLDIKKDSTGMVVVENVTVMSISTIEELNSIIQRGSERRHISGTQMNDESSRSHLILSIVIESTNLQSQSVAKGKLSFVDLAGSERVKKSGSTGSQLKEAQSINKSLSALGDVISSLSSGGQHTPYRNHKLTMLMSDSLGGNAKTLMFVNVAPTESNLDETNNSLMYASRVRSIVNDPNKNVSSKEVARLKKLVAYWKQQAGRTLEYDDLEEIQDERPTKENGNGNR 1271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01030 1271 CDD KISc_C_terminal 895 1220 - -
Gma16g01030 1271 Coils Coil 624 686 - -
Gma16g01030 1271 Gene3D - 282 386 - -
Gma16g01030 1271 Gene3D - 501 609 IPR011993 -
Gma16g01030 1271 ProSiteProfiles FERM domain profile. 283 597 IPR000299 GO:0005856
Gma16g01030 1271 ProSiteProfiles MyTH4 domain profile. 119 278 IPR000857 GO:0005856
Gma16g01030 1271 Pfam Kinesin motor domain 903 1218 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma16g01030 1271 Gene3D Kinesin motor domain 884 1220 IPR036961 -
Gma16g01030 1271 Gene3D MyTH4 domain 98 280 IPR038185 -
Gma16g01030 1271 Gene3D - 1221 1268 - -
Gma16g01030 1271 SMART kinesin_4 895 1226 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma16g01030 1271 SUPERFAMILY PH domain-like 503 591 - -
Gma16g01030 1271 ProSiteProfiles Kinesin motor domain profile. 897 1218 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma16g01030 1271 Coils Coil 825 862 - -
Gma16g01030 1271 CDD FERM_B-lobe 398 496 IPR019748 -
Gma16g01030 1271 Pfam MyTH4 domain 172 276 IPR000857 GO:0005856
Gma16g01030 1271 PRINTS Kinesin heavy chain signature 969 990 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma16g01030 1271 PRINTS Kinesin heavy chain signature 1088 1105 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma16g01030 1271 PRINTS Kinesin heavy chain signature 1119 1137 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma16g01030 1271 PRINTS Kinesin heavy chain signature 1168 1189 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma16g01030 1271 Coils Coil 701 721 - -
Gma16g01030 1271 Pfam FERM central domain 389 503 IPR019748 -
Gma16g01030 1271 CDD FERM_C_KCBP 500 608 - -
Gma16g01030 1271 SUPERFAMILY Second domain of FERM 381 498 IPR035963 -
Gma16g01030 1271 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 619 1271 - -
Gma16g01030 1271 ProSitePatterns Kinesin motor domain signature. 1118 1129 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gma16g01030 1271 SMART B41_5 279 503 IPR019749 -
Gma16g01030 1271 Coils Coil 754 781 - -
Gma16g01030 1271 PANTHER KINESIN-RELATED 619 1271 IPR027640 GO:0003777|GO:0007018
Gma16g01030 1271 SMART MyTH4_1 119 278 IPR000857 GO:0005856
Gma16g01030 1271 Gene3D - 395 496 IPR014352 -
Gma16g01030 1271 MobiDBLite consensus disorder prediction 1 39 - -
Gma16g01030 1271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 897 1245 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01030 Gma-Chr16 25924965 25934624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01030 53 1268 Calmodulin-binding Proteins AT5G65930 72.742 0.0 1794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01030 - - gmx:100810661 2399.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01592 01 51519334 51529164 Gma16g01030 16 25924965 25934624 PCT
Gma11g00818 11 6863622 6872096 Gma16g01030 16 25924965 25934624 PCT
Gma16g01030 16 25924965 25934624 Gma01g01592 01 51519334 51529164 PCT
Gma16g01030 16 25924965 25934624 Gma11g00818 11 6863622 6872096 PCT